Gene Rleg2_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1782 
Symbol 
ID6980519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1826194 
End bp1826898 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID643396504 
Productanti-ECFsigma factor, ChrR 
Protein accessionYP_002281294 
Protein GI209549377 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0336195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.05616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA ACGACGACCT CTCCGAGCGC GCCCTCGTGC ATGCCGGCCG GCTCGAATGG 
ATGCCGAGCC CCACGAAAGG CGTGGATCGG CGGATGCTGT TTCGCATCGG CGGCGAAAAG
GCCCGCGCCA CGTCGATCGT GCGCTATGCG GCCGGCAGCC GGTTCCCGCA TCACGAACAT
CCAGGCGGCG AAGAGTTTCT CGTTCTGGAC GGCGTCTTTC AGGACGAGAG CGGCGATTTC
CCCACCGGCA GCTACGTTCG AAATCCTCCC GGAACCGGGC ATGCGCCGGG AAGCGAGAAC
GGGTGCGTGA TCCTCGTCAA GCTCTGGCAG TTCAAGCAAA GCGACCGGGA ACGGATCGTC
CGCCTGGCCG GTCAAGGCCG GAGCGGCGAG CTTGGCGGTG CGGTGATGTC GTCAACAATC
CTTTTCGATG GAGCAGACGA GCGTGTGATG CTCGAGGACT GGCAGGCACA CGCCGACATC
GAGCTCGCCA ATCTCCAAGG ACTTGAGCTG CTGGTGATCG ACGGCTCCCT GACTGAGGCC
GGCGACACAC TTGAACGCTG GAGCTGGCTG CGCCTTCCCG GTGGGCAAAT ATTCCGCGCG
CGGGTTGGAG ATCACGGCGC AAAGGTCTGG TACAAGTCGG CCCCTCTGCT TCACAACGAC
GTCTGCAGCT TCGACCAGGC CGACGACAAA GGACAGGCGA GATGA
 
Protein sequence
MLLNDDLSER ALVHAGRLEW MPSPTKGVDR RMLFRIGGEK ARATSIVRYA AGSRFPHHEH 
PGGEEFLVLD GVFQDESGDF PTGSYVRNPP GTGHAPGSEN GCVILVKLWQ FKQSDRERIV
RLAGQGRSGE LGGAVMSSTI LFDGADERVM LEDWQAHADI ELANLQGLEL LVIDGSLTEA
GDTLERWSWL RLPGGQIFRA RVGDHGAKVW YKSAPLLHND VCSFDQADDK GQAR