| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1772 |
|---|
| Symbol | |
|---|
| ID | 6980509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 1812949 |
|---|
| End bp | 1813785 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643396494 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002281284 |
|---|
| Protein GI | 209549367 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.247305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0147322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGA GTGTTTTTTC CCTCGGCAGG GTCCTCCGCC TGAGCCTGCT TTCCCTTGGG
GCGATCATCT TCCTCGCGCC CTACATCTTC ATGATCTCGG CGGCCGGCAA GACCCAGAGC
GACATCTTCA CCTCGTCGCT GTCGCTGATG CCGGCGCATC TCGCCTATAT CGAGAATTTC
GCCAAGGCCT TGAGCCGGGT GCCGATGGCG CGGCTCCTGT GGAACGGCGT CGTCGTCTGC
GGGCTGATCT TCTTCTTCCA GGTGCTGGTG GCGATCCCTT GCGCCTACGC CATGGCCAAG
CTGCGTTTCG GCGCGGCGCG GGCCATGATG GTGCTGGTCA TGCTCGGCCT TCTCGTGCCG
ATCCATGCGA CGGCGCTACC GCTCTATGTC GCCTTCGACC GCGCCTCGCT GCTCAACAGC
TATGCCGCTC TTGTCGCGCC CTTTACCATT TCGGTCTTCG CGATCTTCAT GTTCCTGCAG
TTCTTCCGCG CCATGCCCGA CGATCTCATT CATGCCGCCC GTCTCGACGG CATGTCGGAG
CTCGGCATCG TCGCCCGCGT CATCGTGCCG AATGCCTGGC CCGCGGTCAC CGCCTTCGCT
ATCTTCTCGG TGGTCGCCCA CTGGAACGAT CTCTACTGGT CGCTGATCGT CATCAGCAAG
CAGGACTATG CCACGCCGCC GCTCGGGCTG ATGTATTTCC GCGCCGCCGA GGCCGGCGAC
GACTACGGCG CGCTGATGGC GGCGACCCTG ATCATTACCC TTCCCCTCGT CGCGGCTTTC
CTGTTTGCGC AGAAGCGTTT CGTCGAGGGC ATCACCATGA CCGGTCTCAA AGGCTGA
|
|---|
| Protein sequence | MMTSVFSLGR VLRLSLLSLG AIIFLAPYIF MISAAGKTQS DIFTSSLSLM PAHLAYIENF
AKALSRVPMA RLLWNGVVVC GLIFFFQVLV AIPCAYAMAK LRFGAARAMM VLVMLGLLVP
IHATALPLYV AFDRASLLNS YAALVAPFTI SVFAIFMFLQ FFRAMPDDLI HAARLDGMSE
LGIVARVIVP NAWPAVTAFA IFSVVAHWND LYWSLIVISK QDYATPPLGL MYFRAAEAGD
DYGALMAATL IITLPLVAAF LFAQKRFVEG ITMTGLKG
|
|---|
| |