Gene Rleg2_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1719 
Symbol 
ID6980456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1754655 
End bp1755731 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID643396442 
Productbasic membrane lipoprotein 
Protein accessionYP_002281232 
Protein GI209549315 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00548824 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT ACGCATTCGC TCTCGCCGCC TCGGCTGCCG CCGTGATCGG CATCTCGTCG 
GCCGCTCAGG CTGCCGATAA GACGAAGGTC TGCTTCGTCT ATGTCGGTTC GCACACCGAT
GGCGGTTATT CGCAGGCGCA TGATCTCGGC CGCCAGCAGG TTCAGGCCGA ATTCGGCGAC
AAGATCGAAA CGCCTTACCT CGAAAACGTG CCGGAAGGCC CGGATGCCGA GCGCGCCATC
GAGCGCCTTG CCCGTTCCGG CTGCAAGCTG ATCTTCACGA CGTCCTTCGG CTTCATGGAT
GCGACGGTCA AGGTTGCCGC CAAGTTCCCG AAGGTCAAGT TCGAGCACGG CACCGGCTAC
AAATCCGGCC CCAACCTCGC CACCTACAAT TCGCGCTTCT ATGAAGGCCG CTACATCCTC
GGCCAGATCG CCGCCAAGAC CTCGAAGAAT CACGGTGCGG CCTACATCGC CTCCTTCCCG
ATTCCCGAAG TGGTGATGGG CATCAACTCC TTCGAGCAGG GCGCCAAGTC GGTCGATCCG
AGCTTCAAGC TGAAGGTCAT CTGGGTCAAC ACCTGGTTCG ACCCCGGCAA GGAAGCCGAT
GCCGCCAAGG CGATGGTCGA CCAGGGCGTC GACGTGCTGA CCCAGCACAC CGATACGACG
GCGCCGATGC AGGTCGCCGA AGAGCGCGGC ATCCACGCCT TCGGTCAGGC ATCCGACATG
ATCGCGGCAG GCCCCAAGGC GCAGCTGACG GCGATCGTCG ATACCTGGGG CACCTACTAC
TCCAAGCGCG TTCACGCGCT TCTGGACGGC ACCTGGAAGT CCGAGCAGAG CTGGGACGGC
CTGAAGGACG GCATCCTGAA GATGGCGCCC TACACCAACA TGCCTGACGA CGTGAAGAAG
ATGGCCGAGG AAACCGAAGC CAAGATCAAG TCGGGCGAGG TGCATCCCTT CACCGGCCCG
ATCAATAAGC AGGACGGCAC GCCTTGGCTG AAGGCCGGCG AGAAGGCAGA TGACGGCACG
CTGCTCGGCA TGAATTTCTA TGTCGAAGGC GTCGACGACA AGCTGCCGGC GCAATAA
 
Protein sequence
MKKYAFALAA SAAAVIGISS AAQAADKTKV CFVYVGSHTD GGYSQAHDLG RQQVQAEFGD 
KIETPYLENV PEGPDAERAI ERLARSGCKL IFTTSFGFMD ATVKVAAKFP KVKFEHGTGY
KSGPNLATYN SRFYEGRYIL GQIAAKTSKN HGAAYIASFP IPEVVMGINS FEQGAKSVDP
SFKLKVIWVN TWFDPGKEAD AAKAMVDQGV DVLTQHTDTT APMQVAEERG IHAFGQASDM
IAAGPKAQLT AIVDTWGTYY SKRVHALLDG TWKSEQSWDG LKDGILKMAP YTNMPDDVKK
MAEETEAKIK SGEVHPFTGP INKQDGTPWL KAGEKADDGT LLGMNFYVEG VDDKLPAQ