| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1636 |
|---|
| Symbol | |
|---|
| ID | 6980372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 1666399 |
|---|
| End bp | 1667835 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643396361 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_002281152 |
|---|
| Protein GI | 209549235 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0591457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.234749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCCA AGACTGAGCA GCTTTCGGTA TTTCCAGCCT TCTTTCGCGT GGAAGGCCAG
AAGACGGCTG TCTTCGGCAA TGGTGACGAG GCTTTCGCCA AGGTGCGGCT GCTGCTCAAC
ACGCGGGCGC GGATCGTCGC CTATGCCGAC AGGCCGGAAG CCGATTATCA TGCTTTCCTG
ATTGCCAACC GCATCGAGAC TGTGCGCGCC GGCTTTTCCG CCGAGCAGGT CGCGGGTTCG
GCACTGGTCT TTGCCGCCAC CGGCGATGAG GCCGATGATC GCGAGATCGT CGATGCCGCC
CGTGCTGCTA GAATTCCGGC CAATGCCGTC GATCAGCCGG ATTACTGCGA TTTCTTTACC
CCGGCGCTGG TCAATCGCGC GCCCGTCGCC GTGGCGATCG GCACCGAAGG GGCAGGGCCG
GTTCTGGCGC AGATGATCCG GGCGCAGATC GATCAACTGC TTTCCCCCTC GCTCGGGCGG
CTTGCCGGCC TGGCGACGAG CTATCGCAAA TCAGTCGAGC AGCTGGTGCC CCGTGGCGTT
TCCCGCCGCG TCTTCTGGCG CCGCTTCTTC TCCGGCGCCG TTGCCGATGC GGTCGCCAAC
GGCAACCTGC CGCAGGCCCG CCACGCCGCC GACCGGCTGC TGGGCTCGAT GGACAAGGTC
GCCGGCCATA TCTGGCTGGT CGGCGCCGGC CCAGGCGCCG AGGATCTGCT GACGCTGCGC
GCCCAGCGCG TGATGATGGA AGCCGATGTC ATCGTCTATG ACGCGCTCGT GCCGCAGGCG
ATCGTCGATA TGGGTCGCCG CGATGCCGAG CGGCTTTCGG TCGGCAAGCG CAAGGGCTGC
CATTCGAAAT CGCAGGAAGA GATCAACGAC CTCCTGGTCG ATCTCGGCCG CCAGGGCAAA
CGCGTCGTCC GCCTGAAATC AGGCGATCCG CTGGTCTATG GCCGGGCAGG GGAAGAGATG
GCGGCGTTGC GCGCTGCCGG CATCACCTAT GAGGTCGTGC CCGGCATCAC CTCGGCCTTC
GCCGCCGCCG CCGATTTCGA GCTGCCGCTG ACGCTGCGCG GCGTCGCTTC GTCACTTGTT
TTCACCACCG GCCATGATCT CACCGGCGAC GTACTGCCCG ATTGGGCAAG CCTTGCCGTC
TCCGGCGCGA CGATCGCCGT CTATATGGGC CGCACGGTTG CCGCCTCGGT CGCCGAGCGG
CTGATGCAGG CCGGCATTCC CTCCGAGACC ACGGTCGCCG TCATCGAAAA TGCCAGCCGC
GCGGAGCGCC GCCTGCTGCA TGGCACGCTT GCCGATCTGC CCGATCTGCA GCATCGCGAC
GAGTTGACCG GCCCGGTTAT GGTCATTATC GGCGATGCGG TCGCCGGCGC CAATTTCGAA
CTGTCCGAGC CGCTGGTGCG TGCGAACGCC CGGCTCGAGG AACTTGCAAG GAGCTGA
|
|---|
| Protein sequence | MSPKTEQLSV FPAFFRVEGQ KTAVFGNGDE AFAKVRLLLN TRARIVAYAD RPEADYHAFL
IANRIETVRA GFSAEQVAGS ALVFAATGDE ADDREIVDAA RAARIPANAV DQPDYCDFFT
PALVNRAPVA VAIGTEGAGP VLAQMIRAQI DQLLSPSLGR LAGLATSYRK SVEQLVPRGV
SRRVFWRRFF SGAVADAVAN GNLPQARHAA DRLLGSMDKV AGHIWLVGAG PGAEDLLTLR
AQRVMMEADV IVYDALVPQA IVDMGRRDAE RLSVGKRKGC HSKSQEEIND LLVDLGRQGK
RVVRLKSGDP LVYGRAGEEM AALRAAGITY EVVPGITSAF AAAADFELPL TLRGVASSLV
FTTGHDLTGD VLPDWASLAV SGATIAVYMG RTVAASVAER LMQAGIPSET TVAVIENASR
AERRLLHGTL ADLPDLQHRD ELTGPVMVII GDAVAGANFE LSEPLVRANA RLEELARS
|
|---|
| |