Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1629 |
Symbol | |
ID | 6980365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1657916 |
End bp | 1660186 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643396354 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002281145 |
Protein GI | 209549228 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.102015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.506038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGG ATGGGGTATC GCCGGCGGCG GCGGGCGAGG CGGTGACCAC GGTGACCGAT CGCCGCGCCC TTTTCGCCGT GCCCGGCCTG GTGCTCGCCG GTGGAGCGCT TCTCTGCGCC ACGGCGACAC TGTTTGTGCT GCTCGGCCTC ACGCCGATCG CGCCGACGTC GCATGTCGTC ATCACCTCGG TCATCGTCAA TTCCTTCTTC GTCCTGACGC TGCTGGCGCT GATCGCCCGT GAGGTGGCAA GGCTGCTCAA GGCGCGTACC CGCGGCCGGG CGGCTGCACG CCTGCATATC CGCATCGTCG TGCTCTTCTC GATCGTCGCG ATCACGCCGG CGATCCTCGT CGCCATCTTT GCCAGCATCA CGCTGAATGC CGGCCTCGAT CGCTGGTTTG CGTTGCGCAC CCAGTCGATC GTCAGCTCGT CGCGCAACAT CGGCCAAGCC TATATGATGG AAAACGCCAG CTACCTGCAG GGGCAGACGG TTTCCATGGC CAACGACCTG GAGCGCAACC GCGCGCTCTA CAGCCTCGAC AGGACGGGCT TTGCCGACCT GATGACGCGC CAGGCGAGGG GGCGCGGCCT GCTCGGCTCC TTCCTCGTCG AGCGCGACGG TTCGGTGATC GTCCAGGCCG ACATCACCAC CGAAAAGCCG TTGCCGGCAA TCCCGCAGGA CGCGCTGGAG AAGGCCGCGG CCGGCCAGCC GACGCTCATT CCGCCTGGCG TCACCAACCT CGTCGGCGCC ATCATCAAGC TCGATGCCAT CCAGGGCACC TTCCTCTATA CGGTGCGCGC CGTCGATCCG AAGGTCATGG GCGCCATGCG GATGATGGAA GAGAACGCCA CCGAATATCG CTCGATGGAA GCCAACCGCT TCTCGCTGCA GATCGCGTTC GCCGTGCTCT ATATCGGCTT CGCGCTGATC GTGCTGCTCG CGGCGATCTG GACGGCGATC GCGGTGGCCG ACCGCATCGT CCGGCCGATC CGGCTCCTGA TCACCGCGGC CGACAGCGTG GCGTCGGGCA ATATGGATAT CGTCGTGCCG GTGCACGCCG TCGATGGCGA CGTCGCCAAT CTGTCGCGTA CCTTCAACAA GATGATTTCG GAAATCCGCA CCCAGCGCGA CGAGATCCTC GAAGCCAAGG ACGAGGTCGA CGACCGCCGC CGCTTCATCG AGGCGGTGCT GTCGGGCGTC ACCGCAGCGG TCATCGGCGT CGAGCAGGAC CGCCGCATCG CCATCGTCAA CAGTTCGGCC GAGACGCTGA TGTCGCTGTC GGCCGATGAG ATGCTCGGCA AGCAGCTGGC CGAGATCGCG CCTGAGGTCG ATCACGTGCT GACCGAGGCG GCGTCGCGGC ATCGCGGCGA TTTCCGCAAG CAGATCGCGC TCGTGCGCGG CGGCACCGTG CGGACGCTGA GCGTGCAGGT CACCCGCGAG GAAGTGCGCG ATATGAGCGA ATCCTATGTG ATCACGCTCG ACGACATCAC CGACCTCGTC ATCGCCCAGC GCTCGACCGC CTGGGGTGAC GTCGCACGGC GCATCGCCCA TGAGATCAAG AACCCGCTGA CCCCGATCCA GCTTTCCGCC GAGCGCATTC AGCGCCGCTA CGGCAAGCAG ATCGATCCGG GCGATCGGAC CGTCTTCGAC CAGTGCACGG ATACGATCAT CCGCCAGGTC GGCGATATCG GTCGCATGGT CGACGAATTC TCCGCCTTCG CCCGCATGCC GAAGCCGACC AAGGAGCCGA GCGACCTGCG CGAGATCCTG CGCGACGCGA TCTTCCTGCG CGAGATGGGC AACAACCACG TCACCTTCGG GCAGGATTTC GGCGACCAGC CGCTGGAGGG CCTGTTCGAC AGCCGCATGC TCGGCCAGGC TTTCGGAAAT CTGATCAAGA ATGCCGTGGA GGCAATCGAG GCCGTTCCGA GCGACGAACG GGACGAACGC AAGATTCTCG TTCGCGCCGC CCTCGATGCC GCCCGCGACC GCTTCACCGT CGATGTCATC GACAATGGCC GCGGCCTGCC GGTGGAGAAC CGCCACAGCA TTCTGGAACC CTATATGACG ATGCGCGAGA AGGGCACCGG CCTCGGTCTC GCCATCGTCA AGAAGATCAT CGAAGAACAT GGCGGGCAGC TCGAGCTGCA TGATGCGCCC GCCGATTTTG ACCGGGGAAG AGGGGCCATG ATCCGCGTGC ATCTGCCACG CCGGGATCCG ACGCCCACCT CTCCCGCAGC CAATGACAAG GAAAGCGTTT ATGGCCTCTG A
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Protein sequence | MTQDGVSPAA AGEAVTTVTD RRALFAVPGL VLAGGALLCA TATLFVLLGL TPIAPTSHVV ITSVIVNSFF VLTLLALIAR EVARLLKART RGRAAARLHI RIVVLFSIVA ITPAILVAIF ASITLNAGLD RWFALRTQSI VSSSRNIGQA YMMENASYLQ GQTVSMANDL ERNRALYSLD RTGFADLMTR QARGRGLLGS FLVERDGSVI VQADITTEKP LPAIPQDALE KAAAGQPTLI PPGVTNLVGA IIKLDAIQGT FLYTVRAVDP KVMGAMRMME ENATEYRSME ANRFSLQIAF AVLYIGFALI VLLAAIWTAI AVADRIVRPI RLLITAADSV ASGNMDIVVP VHAVDGDVAN LSRTFNKMIS EIRTQRDEIL EAKDEVDDRR RFIEAVLSGV TAAVIGVEQD RRIAIVNSSA ETLMSLSADE MLGKQLAEIA PEVDHVLTEA ASRHRGDFRK QIALVRGGTV RTLSVQVTRE EVRDMSESYV ITLDDITDLV IAQRSTAWGD VARRIAHEIK NPLTPIQLSA ERIQRRYGKQ IDPGDRTVFD QCTDTIIRQV GDIGRMVDEF SAFARMPKPT KEPSDLREIL RDAIFLREMG NNHVTFGQDF GDQPLEGLFD SRMLGQAFGN LIKNAVEAIE AVPSDERDER KILVRAALDA ARDRFTVDVI DNGRGLPVEN RHSILEPYMT MREKGTGLGL AIVKKIIEEH GGQLELHDAP ADFDRGRGAM IRVHLPRRDP TPTSPAANDK ESVYGL
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