Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1617 |
Symbol | |
ID | 6980353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1642341 |
End bp | 1643288 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643396342 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_002281133 |
Protein GI | 209549216 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGAACC GTGTTGTGCT GGCGCCGATG TCCGGCGTCA CGGACATGCC CTTCCGCGAG CTCGCCTGGC GCTTCGGCGC CGGCCTCGTC GTCACCGAAA TGGTGGCGAG CCGCGAACTG GTCAACGACA CGGCCGAATC CTGGTCGCGG CTGAGAGCAG CGGGCTTCCG GCCGCACATG GTGCAGCTCG CCGGCCGGGA GGCGCACTGG ATGGCGGAGG CGGCGAAGAT CGCTGCCGAT CACGGCGCCG ATATCATCGA CATCAATATG GGCTGCCCGG CAAAGAAGGT GATCGGCGGT TATTCCGGCT CGGCGCTGAT GCGCGATCCC GATCACGCGC TCGGCCTCAT CGAGGCGACG GTCAAGGCCG TCGATATTCC CGTGACGCTG AAAATGCGCC TCGGCTGGGA TGAGAACTCG ATCAACGCGC CCGAGATCGC GCGCCGCGCC GAGGCGGCCG GCATTCAGCT CGTGACCATT CATGGGCGCA CCCGCATGCA ATTCTATGAA GGCCGCGCCG ATTGGGATGC GATCCGTCCC GTCCGCGACG TCATCTCCAT CCCGCTGATC GCCAATGGCG ATGTCGAGAC CGCCGAAGAT GCGCAGGAAA TCCTGCGCCG CTCCGGCGCC GATGCCGTCA TGATCGGCCG GGGCTGCCAG GGCAGGCCGT GGCATGCCGG TGTGCTCGCC GGTGGAGCGG AGCCGCGACG CGAAGACATT GCCGATATTG CCGTCGAACA TTATCGGATG ATGCTCGATT TCTACGGCGA GGCGGTGGCG ATCCGCCACG CCCGCAAGCA CCTCGGCTGG TATCTCGAGC GTTTCGCCGC TGATCTTGCC GGCGGCGACA AGGCTGCGAT CATGACCTCG CGCGATCCGC GCGAGGTGGC CGCGCGCCTT TACGAGGCTT TGGCATCGGG TGTTGTCGAC AGCCGGGAGG CGGCATGA
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Protein sequence | MRNRVVLAPM SGVTDMPFRE LAWRFGAGLV VTEMVASREL VNDTAESWSR LRAAGFRPHM VQLAGREAHW MAEAAKIAAD HGADIIDINM GCPAKKVIGG YSGSALMRDP DHALGLIEAT VKAVDIPVTL KMRLGWDENS INAPEIARRA EAAGIQLVTI HGRTRMQFYE GRADWDAIRP VRDVISIPLI ANGDVETAED AQEILRRSGA DAVMIGRGCQ GRPWHAGVLA GGAEPRREDI ADIAVEHYRM MLDFYGEAVA IRHARKHLGW YLERFAADLA GGDKAAIMTS RDPREVAARL YEALASGVVD SREAA
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