Gene Rleg2_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1617 
Symbol 
ID6980353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1642341 
End bp1643288 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID643396342 
ProductTIM-barrel protein, nifR3 family 
Protein accessionYP_002281133 
Protein GI209549216 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGAACC GTGTTGTGCT GGCGCCGATG TCCGGCGTCA CGGACATGCC CTTCCGCGAG 
CTCGCCTGGC GCTTCGGCGC CGGCCTCGTC GTCACCGAAA TGGTGGCGAG CCGCGAACTG
GTCAACGACA CGGCCGAATC CTGGTCGCGG CTGAGAGCAG CGGGCTTCCG GCCGCACATG
GTGCAGCTCG CCGGCCGGGA GGCGCACTGG ATGGCGGAGG CGGCGAAGAT CGCTGCCGAT
CACGGCGCCG ATATCATCGA CATCAATATG GGCTGCCCGG CAAAGAAGGT GATCGGCGGT
TATTCCGGCT CGGCGCTGAT GCGCGATCCC GATCACGCGC TCGGCCTCAT CGAGGCGACG
GTCAAGGCCG TCGATATTCC CGTGACGCTG AAAATGCGCC TCGGCTGGGA TGAGAACTCG
ATCAACGCGC CCGAGATCGC GCGCCGCGCC GAGGCGGCCG GCATTCAGCT CGTGACCATT
CATGGGCGCA CCCGCATGCA ATTCTATGAA GGCCGCGCCG ATTGGGATGC GATCCGTCCC
GTCCGCGACG TCATCTCCAT CCCGCTGATC GCCAATGGCG ATGTCGAGAC CGCCGAAGAT
GCGCAGGAAA TCCTGCGCCG CTCCGGCGCC GATGCCGTCA TGATCGGCCG GGGCTGCCAG
GGCAGGCCGT GGCATGCCGG TGTGCTCGCC GGTGGAGCGG AGCCGCGACG CGAAGACATT
GCCGATATTG CCGTCGAACA TTATCGGATG ATGCTCGATT TCTACGGCGA GGCGGTGGCG
ATCCGCCACG CCCGCAAGCA CCTCGGCTGG TATCTCGAGC GTTTCGCCGC TGATCTTGCC
GGCGGCGACA AGGCTGCGAT CATGACCTCG CGCGATCCGC GCGAGGTGGC CGCGCGCCTT
TACGAGGCTT TGGCATCGGG TGTTGTCGAC AGCCGGGAGG CGGCATGA
 
Protein sequence
MRNRVVLAPM SGVTDMPFRE LAWRFGAGLV VTEMVASREL VNDTAESWSR LRAAGFRPHM 
VQLAGREAHW MAEAAKIAAD HGADIIDINM GCPAKKVIGG YSGSALMRDP DHALGLIEAT
VKAVDIPVTL KMRLGWDENS INAPEIARRA EAAGIQLVTI HGRTRMQFYE GRADWDAIRP
VRDVISIPLI ANGDVETAED AQEILRRSGA DAVMIGRGCQ GRPWHAGVLA GGAEPRREDI
ADIAVEHYRM MLDFYGEAVA IRHARKHLGW YLERFAADLA GGDKAAIMTS RDPREVAARL
YEALASGVVD SREAA