Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1604 |
Symbol | |
ID | 6980340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1631178 |
End bp | 1632563 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643396329 |
Product | pyruvate dehydrogenase subunit beta |
Protein accession | YP_002281120 |
Protein GI | 209549203 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00806914 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTATCG ATATCCTCAT GCCCGCCCTC TCTCCGACCA TGGAAGAAGG CACGCTGTCC AAATGGCTGA AGCAGGAAGG TGACAAGGTC ACTTCTGGCG ACGTCATTGC CGAAATCGAA ACCGACAAGG CGACGATGGA AGTCGAAGCC GTCGACGAAG GCGTCATCGG CAAGCTGCTC GTCGATGCCG GCACCGAAGG CGTCAAGGTC AACACCAAGA TCGCCGTGCT GCTGCAGGAT GGCGAATCGG CCGCGGATAT CTCCGCCGCC AAGCCGGCTG CTGCTGCCGC ACCTCAGGCT GCCCAGGAAG AAAAGCCGAC GAATAGCGGC TCGGCTTCCG CACCGCTTCC GGCCGAGCCG AAGGCCGTCG TGCCGAATGA CCCGGAAATT CCGGCCGGCA CCGAAATGGT GTCGATGACG GTGCGCGAAG CGCTCCGTGA CGCCATGGCC GAGGAAATGC GCGCCAGCGA AGATGTCTTC GTCATGGGCG AGGAAGTCGC CGAATATCAG GGCGCCTACA AGGTCACGCA AGGGTTGCTG CAGGAATTCG GCCCCCGCCG CGTCATCGAT ACGCCGATCA CCGAGCACGG CTTTGCCGGC GTCGGCGTCG GCGCCGCCAT GGCCGGCCTT CGCCCGATCG TCGAATTCAT GACCTTCAAC TTCGCCATGC AGGCGATCGA CCACATCATC AACTCGGCTG CCAAGACGCT CTATATGTCC GGCGGCCAGA TGGGCGCTCC GATCGTCTTC CGCGGCCCGA ACGGTGCAGC CGCCCGCGTC GGCGCCCAGC ACAGCCAGGA TTATGCCGCC TGGTACAGCG CCATCCCCGG CCTGAAGGTC GTCATGCCTT ACACGGCAGC CGACGCAAAG GGCCTGTTGA AGGCTGCGAT CCGCGATCCG AACCCGGTCA TCTTCCTGGA AAACGAAATT CTCTACGGTC AGCATTTCGA TGTGCCGAAG CTCGATAATT TCGTCCTGCC GATCGGCAAG GCCCGCATCC ATCGTTCTGG CAAGGATGTC ACCGTCGTCT CCTTCGGCAT CGGCATGACC TATGCGACGA AGGCGGTTGC CGAACTCGAA AAGATCGGCA TCGACGTCGA ACTGATCGAC CTTCGCACCA TTCGCCCGAT GGATCTCCCG ACCGTGATCG AATCGGTGAA GAAGACCGGC CGCCTCGTCA CTGTCGAGGA AGGTTATCCG CAATCTTCAG TCGGCACCGA AATCGCCACC CGCGTCATGC AGCAGGCCTT CGACTATCTC GATGCGCCGA TCCTGACGAT CGCGGGCAAG GACGTGCCGA TGCCCTACGC CGCCAATCTC GAAAAACTGG CGCTTCCGAA CGTCGGCGAA GTCGTCGATG CGGTGAAGGC TGTTTGCTAT AAATAA
|
Protein sequence | MPIDILMPAL SPTMEEGTLS KWLKQEGDKV TSGDVIAEIE TDKATMEVEA VDEGVIGKLL VDAGTEGVKV NTKIAVLLQD GESAADISAA KPAAAAAPQA AQEEKPTNSG SASAPLPAEP KAVVPNDPEI PAGTEMVSMT VREALRDAMA EEMRASEDVF VMGEEVAEYQ GAYKVTQGLL QEFGPRRVID TPITEHGFAG VGVGAAMAGL RPIVEFMTFN FAMQAIDHII NSAAKTLYMS GGQMGAPIVF RGPNGAAARV GAQHSQDYAA WYSAIPGLKV VMPYTAADAK GLLKAAIRDP NPVIFLENEI LYGQHFDVPK LDNFVLPIGK ARIHRSGKDV TVVSFGIGMT YATKAVAELE KIGIDVELID LRTIRPMDLP TVIESVKKTG RLVTVEEGYP QSSVGTEIAT RVMQQAFDYL DAPILTIAGK DVPMPYAANL EKLALPNVGE VVDAVKAVCY K
|
| |