| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1560 |
|---|
| Symbol | |
|---|
| ID | 6980296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1584864 |
|---|
| End bp | 1585637 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643396285 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002281076 |
|---|
| Protein GI | 209549159 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.643949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG CTCCAGCTAA AAAGCTCACC GTTTCCGCAA CGGAAGTGGC GGTCGATATC
ATCAACATGA ACAAGTGGTA CGGCGATTTT CACGTGCTGC GCGACATCAA CCTCAAGGTC
ATGCGCGGCG AGCGCATCGT CATCGCCGGC CCGTCGGGTT CCGGCAAGTC GACGATGATC
CGCTGCATCA ACCGCCTGGA AGAGCATCAG AAGGGCCGCA TTATCGTCGA CGGCACCGAA
CTCACCAACG ACCTGAAAAA GATCGACGAG GTCAGGCGCG AAGTCGGCAT GGTGTTCCAG
CACTTCAACC TCTTCCCGCA CCTGACGATC CTCGAAAACT GCACTTTGGC GCCGATCTGG
GTGCGCAAGA TGCCGAAGAA GCAGGCGGAA GAAGTCGCCA TGCACTTTCT GAAGCGTGTC
AAGATCCCCG AGCAGGCCAA CAAATATCCG GGACAGCTTT CCGGCGGACA GCAGCAGCGC
GTAGCGATCG CCCGCTCGCT GTGCATGAAC CCGAAGATCA TGCTGTTCGA CGAGCCGACC
TCGGCGCTCG ATCCCGAGAT GATCAAGGAA GTGCTCGACA CGATGGTGGG TCTCGCCGAA
GAAGGCATGA CCATGCTCTG CGTCACCCAT GAAATGGGCT TTGCCCGCCA GGTCGCCAAC
CGCGTCATCT TCATGGACCA GGGCCAGATC GTCGAGCAGA ATTCGCCGGC CGAGTTCTTC
GACAATCCGC AGCACGAACG CACCAAGCTG TTCCTCAGCC AGATTCTGCA TTAG
|
|---|
| Protein sequence | MAEAPAKKLT VSATEVAVDI INMNKWYGDF HVLRDINLKV MRGERIVIAG PSGSGKSTMI
RCINRLEEHQ KGRIIVDGTE LTNDLKKIDE VRREVGMVFQ HFNLFPHLTI LENCTLAPIW
VRKMPKKQAE EVAMHFLKRV KIPEQANKYP GQLSGGQQQR VAIARSLCMN PKIMLFDEPT
SALDPEMIKE VLDTMVGLAE EGMTMLCVTH EMGFARQVAN RVIFMDQGQI VEQNSPAEFF
DNPQHERTKL FLSQILH
|
|---|
| |