| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1554 |
|---|
| Symbol | |
|---|
| ID | 6980290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1578924 |
|---|
| End bp | 1580957 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643396279 |
|---|
| Product | Hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_002281070 |
|---|
| Protein GI | 209549153 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.469173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT ACTACGTAGC GACGACTGGC AGCGACAGCG GTAACGGCAG TGCCTCTTCT
CCTTTCCGCA CGATCAGTGA CGCGATGGCG TCGAACCTTA AGCCCGGCGA CGAGGTCGTG
GTTAAAGCGG GGACCTACAA CGAGAGCATT AATTTCGACA AGGACGGCTC GGCGGCAGGC
AACATCACGC TGCGCTCGGA AGTTCCCGGC GCAGCACTGA TCCGGCCGCC CGCGGGCTCC
TACACCGGGA TCAGTGTCAA CGCCAATTAC GTTGTCATCA ACGGCTTCGA CATCAAGGGC
GGCAACGGCG ACGGCATCGA AGCGAACAAC GTCCACCATG TCCAGATCCT CAACAACACG
GTCCACGACA GCGGCGAGTC GGGCATCCAG TTCAACCAAT CGGACTTCAT CCGCATCGAG
GGGAACGAGA CCTACAATAA CGCGTCGTCG GGCTGGTTCT CGGGCATCTC GATCTACGAG
AACCGGAACA TTACAGGCGA TACCTCGACG GACGGCTACC GGACGATCGT GCGGAACAAC
GTCTCGCACG ACAACGTCAC GAAGTCGGGT GCGCACACCG ATGGCAACGG CATCATCATC
GACGATTTCC AGAGCACGCA AACGAGCGGT CATCCGAACT ACACATTCAA GACCCTGGTC
GACAACAACC TCGTCTACGA CAACGGCGGC AAAGGCATCC AAGTTGCCTG GAGCGACTCC
GTCACAGTGC AGAACAACAC CGCATACCAC AACAATCAGG ATCCGCTAAA CGACGGAACC
TGGCGCGGCG AGCTCAGCAA CGCGCAGTCG AGCAACAACA CCTGGGTCAA CAACGTCGCC
GTAGCGGATC CGTCGGTGAA CAAGAACAAC ACTGCAGTCG ATAACACGTC GTACGGCGGC
TACAGCAACA ACAACGTCGT CTGGGCCAAC AACCTCACCT ACAACGGCAC GGCCGGCCAG
GCATCGGTCA AGACCGACGG CGGCAACGCG ATGCCGAGCG CGGCGAACGG CAACAAACTC
GGCGTCGACC CGAAATTCGC AGGCGCAGCA AGCGACAACT TCCACCTCGG CTCTGGCTCG
TCGGCGATCG ACGGCGGAAC CAGCAAGTAC GGCGTCGGCT CGGTCGATCT GGACGGCCAC
GCTCGCGTCG TTGGAACTGT CGATATGGGT GCCTACGAAT CGGGCTCCAC CTCGACACCG
ACAACGCCAA CCACGCCGAC CACGCCGACC GAACCAGGTT CGGGAACGCC GACCACGCCA
ACTCAACCGA CAACGCCAAC CGCGCCGACG AAGGAAATCG TGGGCACTAG CGGCAACGAT
ATCCTGCCAC ACACGGGTCA GTCGAACGGC GGCAACGAAA CCTTCAAGGG TCTCGGTGGT
AGTGATGTGT TGAAGGGCGG GGCCGGCGCG GATGCGCTCG ACGGCGGTAC TGGCAACGAC
ACCGCCAGCT ATGCGGGCTC CGGCGCGGTC AACGTCAACT TGGCGACTAA GGTCGCATCG
GGCGGCGATG CGACCGGCGA CAAGATCGCC AGTATCGAAA ACTTGACCGG CTCAAGCTAC
AACGACGTAC TGACCGGCGG CAACGGCGGC GGCAACGTTC TCACTGGCGG GGCTGGCGCG
GACAAGCTGG ACGGCGGCGC CGGCAATGAT GTCCTCATTG GTGGTTCCGG AAAGGACATT
ATGACCGGTG GCACCGGCGA GGATAAGTTT ATCTTGAAAG CACCGACGGA AACCGGGTCC
GGCTTGAACC GCGACGTCAT CACCGACTTC CAGCACGGCA TCGATAAGAT CGACCTCTCG
GCGATCGATG CGAACGGCTC TGCGGCGGGC AATGGAACCT TCCATTTTCA GGCACAGGAG
AATGCCTTGT TCGACCACAA GGCTGGCGCG CTCGCTTGGC ACTATGACGA CCAGTCCGGA
ACCGCGAACG ATGTTACCGT TATCCAGGCC GACACGAACG GCGACGGTGT TCATGACTTC
GAGGTTCAGC TGAAGGGCTT GGTCCACTTA GGGGCAGGCG ATTTTCTCCT GTAA
|
|---|
| Protein sequence | MTTYYVATTG SDSGNGSASS PFRTISDAMA SNLKPGDEVV VKAGTYNESI NFDKDGSAAG
NITLRSEVPG AALIRPPAGS YTGISVNANY VVINGFDIKG GNGDGIEANN VHHVQILNNT
VHDSGESGIQ FNQSDFIRIE GNETYNNASS GWFSGISIYE NRNITGDTST DGYRTIVRNN
VSHDNVTKSG AHTDGNGIII DDFQSTQTSG HPNYTFKTLV DNNLVYDNGG KGIQVAWSDS
VTVQNNTAYH NNQDPLNDGT WRGELSNAQS SNNTWVNNVA VADPSVNKNN TAVDNTSYGG
YSNNNVVWAN NLTYNGTAGQ ASVKTDGGNA MPSAANGNKL GVDPKFAGAA SDNFHLGSGS
SAIDGGTSKY GVGSVDLDGH ARVVGTVDMG AYESGSTSTP TTPTTPTTPT EPGSGTPTTP
TQPTTPTAPT KEIVGTSGND ILPHTGQSNG GNETFKGLGG SDVLKGGAGA DALDGGTGND
TASYAGSGAV NVNLATKVAS GGDATGDKIA SIENLTGSSY NDVLTGGNGG GNVLTGGAGA
DKLDGGAGND VLIGGSGKDI MTGGTGEDKF ILKAPTETGS GLNRDVITDF QHGIDKIDLS
AIDANGSAAG NGTFHFQAQE NALFDHKAGA LAWHYDDQSG TANDVTVIQA DTNGDGVHDF
EVQLKGLVHL GAGDFLL
|
|---|
| |