| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1456 |
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| Symbol | |
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| ID | 6980184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1482177 |
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| End bp | 1484003 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643396177 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002280976 |
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| Protein GI | 209549059 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.721519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCACCA GTGAATTTCA TCCGATCGAG CGGGCCGGGG ATGACGGGAT CGCGGCGCGG
GCGCTGCGGG CGCTCGAGGC GGTGCTCGGC ATAGCCGCAG CGCTCGTGCT CGCCGTGCTG
CTCGCCATGG TGCTCGTCAC CGTCTGCCTG CGCTATTTCT TCGGCACCGG CTTCATTGGC
GCCGAGGATC TCGGCATCTG GCTGCATGTG GCACTGATTG CGCTCGGCGC ACCGCTCAGC
CTCAACAGTG CGCTTGCCAT GCGCCTCGAT GTTTTCGTCA GGATGCTGCC CGAAAGCCTG
CAGAAGGTGA CGCGGATCGG CGCCGATGTC TTCACCGTGC TTTCGGCGTT GATCCTCGCC
TTCGGCGGCA GCGAGATCAT GACGATGCTC GGCGGCGTCT CGCCGACGCT CGGTCTGCCG
GAATGGATCC GCTTCGGCTT CCTCGGCGCC GGCGGCGCGC TGATCCTCAT TGTGCTGCTT
CTGCAGCGCA TCGCCGAAGG CAAGGTCCTG GCGGTTGCTG TTTCGCTGAC CCTCGGTGTC
GCTCTCTATG CCGGCATCCC GCATATCTCG CTTGATCTCG ACTGGCCGCC GAGCATTTTC
CTCGGGCTGA TCGCGGCGAT CGGTCTGGTG CTGGCTGCAC CGCTACCGCA CGCCTTTCTC
GCCGCAGCCT ATGTCGTCAT CGCCTTCGGC AGCAGCCTGC CGGAGCCGGC GATCGTTTCC
TCCACCGTCA CCGGCATATC GAAATTCCTG CTGCTCGCTA TTCCCTTCTT CCTGCTTGCC
GGCGGCCTGT TGACGGCATC AGGTGTGGCC AATCAGCTGG TGCGTTTTGC CGCCGCCATG
GTCGGCCATC GCCGGGCAGG GCTGGCGCAG ACGACACTTC TGACCAGCGT TCTCTTTTCC
GGCGCTTCAG GATCCTCGGT CGCAAATGCT GCTTTCGGCG CGTCGACGTT CCAGCCGGAA
CTGGTCAAGC ACGGCTATCC CCCGGCGCAG GCGGCAGCGA TTATCGCCTC GACATCGGTT
CTCGACAACA TCATCCCGCC GTCGATTGCC TTTCTCATTC TTGCCTCGGC GACCAATCTT
TCCGTCGGCG CGCTGCTGGT CGGCGGCTTC TTCGCCGGCG GGCTGATGGC CATCTGCCTG
GCTGTCGCCA TCCATCTGAC TGTGCGCGAG CAGGTGACCT TGCCGCGCGC GACCGCCAGG
CAGCGCTGGC AATCGGCGGT CCAGGCGATT CCGGCCTTCG GGCTCGGGGT CATCGTGGTC
GTCGGCATCC GCATCGGCAT CGTCACCACG ACGGAGGCGG CAGCGCTCGC CGCCTTCTAC
ACGCTGCTGC TCGGCATCGG CGCGCGGCTC GGCATCCTCT CGCTCTATGC CGCCTTCCGC
CAGGCGGCGG TCGAGGCAGC GGCGATCGGT TTGCTGATCG GCACGGCCGG CCCCTTCGCT
TTCCTGCTCG CCGTCGACGA CGTCTCCGGA CTGATCTCGC ATCTGACGAC GGCGCTTGGC
GGCAGCGCGC TTGCCGTTAT CCTTTTGTCG AACGTCATTC TGCTCGCCGT CGGTCTTGTT
CTCGATATCG GCGCCGCGAT CCTGCTCTTC GGCCCGATCC TGATGCCGGC AGCGGTTGCC
GCCGGCATCG ATCCCATCCA GTTCGGTGTG ATTATCGTCG TCAACCTGAT GATCCACGGG
CTGACACCGC CGCTCGGCAT GCTGATTTTC GTTGTCAGCG GCGTCACCCG CATTCCTGCC
TCAGAACTCT TCCGGGCCGT CGTTCCCTAT CTGCTCGCCC TTCTGGTCTC GCTGGCAATC
CTCTGCGCCT GGGCCATCAT TTTCTAG
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| Protein sequence | MATSEFHPIE RAGDDGIAAR ALRALEAVLG IAAALVLAVL LAMVLVTVCL RYFFGTGFIG
AEDLGIWLHV ALIALGAPLS LNSALAMRLD VFVRMLPESL QKVTRIGADV FTVLSALILA
FGGSEIMTML GGVSPTLGLP EWIRFGFLGA GGALILIVLL LQRIAEGKVL AVAVSLTLGV
ALYAGIPHIS LDLDWPPSIF LGLIAAIGLV LAAPLPHAFL AAAYVVIAFG SSLPEPAIVS
STVTGISKFL LLAIPFFLLA GGLLTASGVA NQLVRFAAAM VGHRRAGLAQ TTLLTSVLFS
GASGSSVANA AFGASTFQPE LVKHGYPPAQ AAAIIASTSV LDNIIPPSIA FLILASATNL
SVGALLVGGF FAGGLMAICL AVAIHLTVRE QVTLPRATAR QRWQSAVQAI PAFGLGVIVV
VGIRIGIVTT TEAAALAAFY TLLLGIGARL GILSLYAAFR QAAVEAAAIG LLIGTAGPFA
FLLAVDDVSG LISHLTTALG GSALAVILLS NVILLAVGLV LDIGAAILLF GPILMPAAVA
AGIDPIQFGV IIVVNLMIHG LTPPLGMLIF VVSGVTRIPA SELFRAVVPY LLALLVSLAI
LCAWAIIF
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