| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1444 |
|---|
| Symbol | |
|---|
| ID | 6980172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1468402 |
|---|
| End bp | 1469853 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643396165 |
|---|
| Product | Deoxyribodipyrimidine photo-lyase |
|---|
| Protein accession | YP_002280964 |
|---|
| Protein GI | 209549047 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.750444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCAAAGG ACGCGGTAAA ACCTGTCATT TTATGGTTTC GCAGGGATTT GCGCCTTGAC
GACAATCAGG CGCTGAATGC CGCCCATCTC TCCGGGCGAC CGATCATCCC CGTTTATATC
AACGAGCCGG CGGCAGCCGG CACGGGTCCG CTCGGCGCTG CGCAGGCCTG GTGGCTGCAT
CATTCGCTGG AAGCGCTTGA TAGATCATTG CACGAGCGGC AGGGCGAGCT GGTGCTTGCC
AGCGGCGATG CGCTCGAGGT GCTCCGCGCC GTCATCAAAA AGAGCGGTGC CGAAGCCGTT
TTCTGGAATC GACGCTACGA TCCGTCGGGC ATCTCGGTCG ACACCCACAT CAAGCAGGAA
TTGGAAAAAC AGGCGATCGA GGCGAGAAGT TTCGGCGGCC AGCTGCTGCA CGAACCGTCC
AGGCTGATGA CCGGCAATGG CACGCCCTAT CGGGTGTATA CGCCATTCTG GCGCGCGCTG
GAGGGTGCGG GCGAAGCCGA GCCGCCGCTG GAGGCGCCGG CGAAGCTGCG GCTGGCGTCG
CAGCGTCCGG CCTCGGAAAC ATTGAAGAGC TGGAAACTGC TGCCGACGAA GCCGGACTGG
GCGAAGGGCT TTGCCGACCT CTGGACGCCG GGCGAGCAAG GCGCAAGAGA GAGGCTCAGC
GCCTTCGTCG AGGACGAACT CAAGGGTTAC AAGGAAAACC GCGACTATCC AGCGAAACCG
GCGACCTCAA TGCTGTCGCC GCATCTGGCG CTCGGCGAGA TCTCCCCTGC CCGCATCTGG
GATGCGACGC GCGGTCTGTC GAACCGGGTG CCGGCGGCCG ACATCGTGCA TTTCCGCAAG
GAGATCGCCT GGCGGGAATT CTCCTACCAC CTGCTTTTCC ATTTCCCGCG TCTTGCCTCG
GAGAACTGGA ACGATCGTTT CGACGGCTTC AAATGGCGCA ACGACGACGG CGATTTCGAG
GCGTGGCGCC GCGGCATGAC CGGCTACCCG ATCGTCGATG CCGGCATGCG CCAGCTCTGG
CGCCACGGCT GGATGCACAA TCGGGTGCGC ATGATCGTCG CCTCCTTCCT CATCAAGGAT
CTGATGATCG ACTGGCGCGA CGGCGAGGCC TGGTTCCGCG ACACGCTGGT CGATGCCGAT
CCCGCCAACA ATGCGGCAAG CTGGCAATGG GTGGCGGGCT CGGGAGCCGA CGCTTCACCC
TTCTTCCGCA TCTTCAATCC GATGCTGCAG GGCGAGACTT TCGATCCCGA CGGCGACTAT
GTCAGAGCCC ATGTGCCGGA GCTTCAACGG CTCGGGGCAA AATACATCCA CCGGCCGTTC
GAGGCGCCGA AGAGCGCGCT CGACGAGGCC GGCATCATCC TCGGGCAGAC CTATCCGAAA
CCGATCGTCG ACCATGCCAG CGCCCGCGAC CGGGCGCTCG CCGCTTACAA AGCCACAAAG
GACGCCGCAT GA
|
|---|
| Protein sequence | MAKDAVKPVI LWFRRDLRLD DNQALNAAHL SGRPIIPVYI NEPAAAGTGP LGAAQAWWLH
HSLEALDRSL HERQGELVLA SGDALEVLRA VIKKSGAEAV FWNRRYDPSG ISVDTHIKQE
LEKQAIEARS FGGQLLHEPS RLMTGNGTPY RVYTPFWRAL EGAGEAEPPL EAPAKLRLAS
QRPASETLKS WKLLPTKPDW AKGFADLWTP GEQGARERLS AFVEDELKGY KENRDYPAKP
ATSMLSPHLA LGEISPARIW DATRGLSNRV PAADIVHFRK EIAWREFSYH LLFHFPRLAS
ENWNDRFDGF KWRNDDGDFE AWRRGMTGYP IVDAGMRQLW RHGWMHNRVR MIVASFLIKD
LMIDWRDGEA WFRDTLVDAD PANNAASWQW VAGSGADASP FFRIFNPMLQ GETFDPDGDY
VRAHVPELQR LGAKYIHRPF EAPKSALDEA GIILGQTYPK PIVDHASARD RALAAYKATK
DAA
|
|---|
| |