| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1439 |
|---|
| Symbol | |
|---|
| ID | 6980167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 1463191 |
|---|
| End bp | 1463835 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643396160 |
|---|
| Product | anti-ECFsigma factor, ChrR |
|---|
| Protein accession | YP_002280959 |
|---|
| Protein GI | 209549042 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3806] Anti-sigma factor |
|---|
| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.297382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCACG AGCAGATCGA CACGATCGAT GCATTGATGG CGCATTATGT CGCCGGTTCC
TTGCCCGAGC CGGCGCGGGT GCTGGTACGA TCCCATCTCG AAATGAAGGC CGACAATCGC
CGCCTGGTGG ACAGCCTCGA ATTGCTGGCC GGGGAGGCGC TGGAAAGCGC TGCTGAAACC
GCCATTGCCG ACCGCGACCG GCAGCTTCAG GCAATCTTTT CCTCTGCCGC TCCGGTCGCA
GCGCCGCAGG CGGCCAGGCG GCCGGAAAAC GCGCTGTTTC CACAAGCGCT GCGCGATTTC
GTCGGCTTCG AGGTCGAGGA CGTGCCGTGG CGCAAGCGGT TGCCGGGTTT CAAGGAATAT
TCCCTCGAAC TCGACGGCTG CGAGGTCAAC CTGATGTGGA TCCGCCCGGG CCGCGCTTTG
CCGGCGCACA CCCACAAAGG CATGGAACTG ATCCTCATCC TCGACGGCGC CTTCAACGAT
GAACGCGGCC GTTTCGGCCC CGGCGACATC TCCATTGCCG ACGAGACGGT CGACCATCGG
CCGGTCGCCG AAAAGGACAG GCCCTGCATC GCCTTTGCCG TTTCGGACGG GCCGGTGAAG
CTCACCGGAT CCCTTCGTCA GATGATCGGC GACCTGATCG GCTGA
|
|---|
| Protein sequence | MIHEQIDTID ALMAHYVAGS LPEPARVLVR SHLEMKADNR RLVDSLELLA GEALESAAET
AIADRDRQLQ AIFSSAAPVA APQAARRPEN ALFPQALRDF VGFEVEDVPW RKRLPGFKEY
SLELDGCEVN LMWIRPGRAL PAHTHKGMEL ILILDGAFND ERGRFGPGDI SIADETVDHR
PVAEKDRPCI AFAVSDGPVK LTGSLRQMIG DLIG
|
|---|
| |