| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1406 |
|---|
| Symbol | |
|---|
| ID | 6980134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 1426208 |
|---|
| End bp | 1427317 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643396127 |
|---|
| Product | 4-hydroxyphenylpyruvate dioxygenase |
|---|
| Protein accession | YP_002280926 |
|---|
| Protein GI | 209549009 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
|---|
| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.584202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCCTT TCCCGCACGA TGCGCCGCCA TCCGAAATCA CCGCGGACAA CCCGGCCGGC
ACCGACGGTT TCGAATTCGT CGAGTTCGCA CATCCCGAAC CCGAGAAGCT CAGCGAACTT
TTCACGCGCA TGGGCTATGT CGCGGTCGCC AGGCACAAGA CGAAAGACAT CACCGTCTGG
CGCCAGGGTG ACATCAACTA TGTCGTCAAT GCCGAGCCCG GCAGCCATGC CGCCCGCTTT
GTCGGGCAAC ATGGTCCCTG CGCCGCATCG ATGGCCTGGC GTGTCGTCGA TGCCAAACAT
GCTTTCGACC ATGCGGTGTC GAAAGGCGCC GTTCCCTATG AAGGCGACGA CAAGATGCTC
GACGTTCCGG CCATCACAGG CATCGGCGGC TCGCTGCTCT ATTTCGTCGA GACCTATGGG
GCGAAGGGGT CGGCTTACGA GGCCGAGTTC GATTGGCTGG GTGAGCGCAA TCCGCGACCC
GAGGGGATCG GTTTCTATTA TCTCGACCAT CTCACCCACA ACGTCTTCCG CGGCAATATG
GACAAGTGGT GGGATTTTTA CCGCGAGCTG TTCAACTTCA AGCAGATCCA CTTCTTCGAC
ATTGACGGCC GCATCACCGG CCTGGTCAGC CGCGCCATCA CCTCGCCCTG CGGCAAGATC
CGCATTCCGC TGAATGAATC GAAGGACGAC ACCAGCCAGA TCGAGGAATA TCTGAAGAAG
TACCGGGGCG AGGGCATCCA GCACATCGCC GTCGGCACCG AGGACATTTA TGGGGCGACC
GACAAGCTCG CCGATAACGG CCTGCGCTTC ATGCCGGGTC CGCCGGAGAC CTATTACAAC
ATGTCCTATG AGCGGGTGAA CGGCCATAGC GAACCCATCG AACGCATGAA GAAACACGGC
ATCCTGATCG ACGGGGAGGG CGTGGTGAAT GGCGGCATGA CGAAAATCCT GCTGCAGATC
TTTTCCAAAA CCGTCATCGG CCCGATCTTC TTCGAATTTA TCCAGCGCAA GGGCGACGAG
GGTTTCGGCG AAGGCAACTT CCGGGCGCTG TTCGAGTCGA TCGAAGCCGA TCAGATCAAG
CGTGGTGTCA TCGGGACGGC AGCGGAGTAA
|
|---|
| Protein sequence | MGPFPHDAPP SEITADNPAG TDGFEFVEFA HPEPEKLSEL FTRMGYVAVA RHKTKDITVW
RQGDINYVVN AEPGSHAARF VGQHGPCAAS MAWRVVDAKH AFDHAVSKGA VPYEGDDKML
DVPAITGIGG SLLYFVETYG AKGSAYEAEF DWLGERNPRP EGIGFYYLDH LTHNVFRGNM
DKWWDFYREL FNFKQIHFFD IDGRITGLVS RAITSPCGKI RIPLNESKDD TSQIEEYLKK
YRGEGIQHIA VGTEDIYGAT DKLADNGLRF MPGPPETYYN MSYERVNGHS EPIERMKKHG
ILIDGEGVVN GGMTKILLQI FSKTVIGPIF FEFIQRKGDE GFGEGNFRAL FESIEADQIK
RGVIGTAAE
|
|---|
| |