Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1352 |
Symbol | secY |
ID | 6980080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1372240 |
End bp | 1373580 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643396073 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_002280872 |
Protein GI | 209548955 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0023208 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.481629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTG CAGCGGAACA ATTGGCATCC AACCTCAATT TTTCGACCTT TGCCAAAGCC GAGGATTTGA AGAAGCGCCT GTGGTTCACA CTGGCAGCTC TCCTCGTTTA CAGGCTCGGT ACCCATATTC CGCTTCCAGG CCTCAATCCC GAAGCCTATG CCCAGGCTTT CCGCGGCCAG GCAGGCGGCA TTCTCGGCCT TTTCAACATG TTTTCTGGCG GCGCCGTTCA GCGCATGGCG ATCTTCGCGC TCGGCATCAT GCCCTATATC TCTGCTTCGA TCATCGTGCA GCTGATGACA TCGGTCGTGC CGGCGCTCGA AAACCTCAAG AAAGAGGGCG AGCAGGGCCG TAAGATCATC AACCAGTATA CCCGCTATGG CACGGTCATC CTCGGTGCGC TCCAGGCCTA CGGCATTGCC GCCGGTCTCG AGAGCGGCCA GGGCCTCGTC GTCGATCCGG GCTTGTTCTT CCGTGTTTCC ACCGTTCTGA CGCTGCTCGG CGGCACGATG TTCCTGATGT GGCTCGGCGA GCAGATCACC TCGCGCGGCA TCGGCAACGG CATTTCGCTG ATCATCTTCG CCGGCATCGC CGCCGGTCTT CCGACCGCTC TTGCCGGCAC GCTCGAGCTC GGCCGCACCG GTGCGCTGTC GACCTTCCTC ATTCTGCTGG TCATCATCGT CGCGATCGGC GTCATCGGGG TCATCGTCTT CGTCGAGCGG GCGCAGCGCC GGCTTTTGAT CCAGTATCCG AAGCGCCAGG TCGGCAACCG GATGTTCCAG GGCGATACCT CGCATCTGCC GCTGAAGCTC AACACCTCGG GCGTCATCCC GGCGATCTTC GCCTCGTCGC TGCTGCTGCT GCCGGCAACG CTTGCAGGCT TTGCCAACAC CACGGCAATG CCCTCCTGGG CAACGTCGAT CGTCGCGGCC CTCGGCCATG GCCAGCCGCT CTACATGGTG CTCTATGCGG CGCTGATCGC CTTCTTCGCC TTCTTCTATA CCGCCATCGT CTTCAATCCG AAGGACACGG CCGACAATCT GAAGAAGCAT GGCGGCTTCA TTCCCGGCAT CCGCCCGGGC GAGCGCACCG CCGAATATAT CGACTACGTG CTGACCCGGA TCACGGTGAT CGGCGCAATC TATCTCGTCT TCGTCTGCAT CCTTCCGGAG ATCTTGGTGT CGCAAACCGG CATCCCATTA TCCCTTGGTG GGACTTCGCT TTTGATCGTG GTTAGCGTAA CTCTTGATAC GGTTGCACAG ATCCAGGGTC ACCTGATCGC GCAGCAATAC GAAGGCCTGA TCAAGAAATC GAAGTTGCGT GGAGGAAAGA GGGGGCGATG A
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Protein sequence | MASAAEQLAS NLNFSTFAKA EDLKKRLWFT LAALLVYRLG THIPLPGLNP EAYAQAFRGQ AGGILGLFNM FSGGAVQRMA IFALGIMPYI SASIIVQLMT SVVPALENLK KEGEQGRKII NQYTRYGTVI LGALQAYGIA AGLESGQGLV VDPGLFFRVS TVLTLLGGTM FLMWLGEQIT SRGIGNGISL IIFAGIAAGL PTALAGTLEL GRTGALSTFL ILLVIIVAIG VIGVIVFVER AQRRLLIQYP KRQVGNRMFQ GDTSHLPLKL NTSGVIPAIF ASSLLLLPAT LAGFANTTAM PSWATSIVAA LGHGQPLYMV LYAALIAFFA FFYTAIVFNP KDTADNLKKH GGFIPGIRPG ERTAEYIDYV LTRITVIGAI YLVFVCILPE ILVSQTGIPL SLGGTSLLIV VSVTLDTVAQ IQGHLIAQQY EGLIKKSKLR GGKRGR
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