Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1304 |
Symbol | |
ID | 6980028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1330925 |
End bp | 1333384 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643396021 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_002280824 |
Protein GI | 209548907 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0651627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAGAC TTTTTGGATA TTTCTTCGGA ATGGCCTGCG TCCTGTTTCT GGTCGCGGCG GCGGGTGTTG CCATCTATCT CGCCAACGTT GCGAAGGATC TCCCCGACTA TGCCGTTCTG AACAGCTATG CGCCGCCGGT GACCACCCGT GTCCACGCCG GCAACGGCGC GCTGATGGCC GAATACGCCA AGGAAAAGCG TCTCTTCCTG CCGATCCAGG CCATCCCCGA CCGTGTCAAG GCGGCATTCC TGTCGGCTGA AGACAAGAAT TTCTACAACC ACCCGGGCGT CGATCTCACC GGTCTCGGCC GCGCCATCCT CGTCAACCTG CAGAATTTCG GTTCCGGCCG CCGCCCCGTC GGCGCGTCGA CCATCACCCA GCAGGTCGCC AAGAACTTCC TTCTGAGCTC CGACCAGACG ATCGACCGCA AGATCAAGGA AGCGATCCTG TCCTTCCGTA TCGAGCAGGC CTACAGCAAG GACAAGATCC TTGAGCTCTA CCTGAACGAG ATTTTCTTCG GCCTGAATTC CTACGGCATC GCCGGCGCCG CGCTCACCTA TTTCAACAAA TCCGTCACCG AGCTGACCGT CGCCGAAGCC GCCTATCTGG CATCCTTGCC GAAAGGCCCG GCCAATTATC ATCCTTTCCG CCATCCGGAA GCTGCGCTCG AGCGCCGCAA CTGGGTGATC GACCGCATGG TCGAGAACGG CTATGTCAGC CAGAGCGACG GCGAGGAAGC CAAGAAGCAG CCGCTCGGCG TCACCGCCCG CACGACCGGC CCCTCGCTTT TTGCTTCGGA CTATTTCGCC GAAGCCGTGC GTCGCCAGCT GATCGACCAA TATGGTGAGA AGGTCCTCTA TGAGGGCGGC CTTTCGGTGC GCACCTCGCT GGATCCGCAG ATGCAGCTCG CTGCCCGCAA GGCGCTGCAG GACGGTCTGG TGACCTATGA CGAGCGCCGC GGTTTCCACG GCCCGATCAA GCAGATCGAT GCAAACGGTG ACTGGGGCAA GGCGCTTGCC GATATTCCGG CACTTGCCGA CGTGCCGGAA TGGCGGCTTG CCGTCGTGCT CGCCGTCTCT GACAGCAACG TCGATATCGG CCTGCAGCCG GCCAAGGATG GAAGCGGCAA GGTTTCGCCC GACCGTCAGC GTGGCACGAT CGACGCCAAG AATATGCAGT GGGCCTTCCG TTCGGCCGAC GCTGCCCGCA AGAGCACGAA ATCGCCGGTC GGCGCCGTCG CCCCCGGTGA TGTCGTCTAC GTCGCAAAGC TCGGCGGCGA CGCCTCGACC TCCTATCGCC TGCAGCAGCC GCCGAAGGTG CAGGGTGGCC TGGTCGCCAT GGATCCGAAG ACCGGCCGCG TGCTCGCCAT GGTCGGCGGC TTCTCCTATT CGCAGTCGGA ATTCAACCGC GCCACCCAGG CGATGCGCCA GCCGGGCTCC TCGTTCAAGC CCTTCGTCTA CGCCGCCGCG ATGGACAACG GCTATACGCC GGCCTCCGTC ATCATGGATG CGCCGATCGA GATCGTCTCC GGCGGCCAGG TCTGGAAGCC GGAAAACTAC GGCGGCGAAG TCGGTGGCCC CTCGACGCTG CGCTCGGGCA TCGAGCATTC GCGCAACCTG ATGACGGTGC GCTTGGCGAA CGACCTCGGC ATGAACATCG TCGCCGAGTA TGCCGAACGC TTCGGCATCT ACGATCATAT GCTGCCGGTT CTCTCCATGT CGCTCGGCGC CGGCGACACC ACCGTGCTGC GCATGGTTTC GGCCTATTCG GTCATTGCCA ATGGCGGCAA GCAGATCAAG CCGACATTGA TCGACCGCAT CCAGGACCGC TACGGCAAGA CGATCTTCAA GCATGAGGAG CGTCTCTGTG AGGGCTGTAA TGCCGGCGAC TGGCAGAACC AGGAAGAGCC GAATGTCGTC GACAACCGCG AAACCGTTCT CGACCCGATG ACTGCCTATC AGATCACCTC GATGATGCAG GGCGTCATCC AGCGCGGCAC CGCCGCCGGC AAGGTCGATC TCGGCGGCCG CGACGTTGCC GGCAAGACCG GCACCACCAA CGACGAGAAG GACGCCTGGT TCGTCGGCTT CACCCCGGAT CTGGTCGCCG GCCTTTATAT GGGCTTCGAT ACGCCGGCCC CGCTCGGCCG CGGCGGCACC GGCGGCGGTC TCTCCGCCCC GATCTTCAAC GAATTCATGC AGGTCGCCGT CAAGGATGCG CCGGAATCGA AATTCGTCAT TCCGCCGGGC ATGAACTTGA TTTCGATCGA CCGCAAGACC GGCATGGCTG CCGTTGACGG CGACCCGAAC ACCATCATCG AGGCCTTCAA ACCAGGCACC GGCCCGGCCG ACAGCTTCTC CGTCATTGGC ATGGACAGCA CCATGGCGCC GGAAGAGATC CTGAAGACCT CGCCGCAGGC AAACCAAGCC GTCCAGACCG GCACGCCCGG CCTGTTCTGA
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Protein sequence | MVRLFGYFFG MACVLFLVAA AGVAIYLANV AKDLPDYAVL NSYAPPVTTR VHAGNGALMA EYAKEKRLFL PIQAIPDRVK AAFLSAEDKN FYNHPGVDLT GLGRAILVNL QNFGSGRRPV GASTITQQVA KNFLLSSDQT IDRKIKEAIL SFRIEQAYSK DKILELYLNE IFFGLNSYGI AGAALTYFNK SVTELTVAEA AYLASLPKGP ANYHPFRHPE AALERRNWVI DRMVENGYVS QSDGEEAKKQ PLGVTARTTG PSLFASDYFA EAVRRQLIDQ YGEKVLYEGG LSVRTSLDPQ MQLAARKALQ DGLVTYDERR GFHGPIKQID ANGDWGKALA DIPALADVPE WRLAVVLAVS DSNVDIGLQP AKDGSGKVSP DRQRGTIDAK NMQWAFRSAD AARKSTKSPV GAVAPGDVVY VAKLGGDAST SYRLQQPPKV QGGLVAMDPK TGRVLAMVGG FSYSQSEFNR ATQAMRQPGS SFKPFVYAAA MDNGYTPASV IMDAPIEIVS GGQVWKPENY GGEVGGPSTL RSGIEHSRNL MTVRLANDLG MNIVAEYAER FGIYDHMLPV LSMSLGAGDT TVLRMVSAYS VIANGGKQIK PTLIDRIQDR YGKTIFKHEE RLCEGCNAGD WQNQEEPNVV DNRETVLDPM TAYQITSMMQ GVIQRGTAAG KVDLGGRDVA GKTGTTNDEK DAWFVGFTPD LVAGLYMGFD TPAPLGRGGT GGGLSAPIFN EFMQVAVKDA PESKFVIPPG MNLISIDRKT GMAAVDGDPN TIIEAFKPGT GPADSFSVIG MDSTMAPEEI LKTSPQANQA VQTGTPGLF
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