Gene Rleg2_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1303 
Symbol 
ID6980027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1329265 
End bp1330560 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content63% 
IMG OID643396020 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_002280823 
Protein GI209548906 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0121599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0027923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATAG GGTGTGGCGG TTTTTTGTTT AAGAGGGCTC GGATCGCGGC GAAATCCGCA 
GGGCGGCGAT CGACATTCGC AAGGCGGATT CTGACGGCGC TTCTGGCCGT CGGTCTGCTG
TCGGCCGTTG CCGGTTCTGT CACCGCTGGA GATCCGCTGC TTGCCTATGG CGCGCGCATC
GTCGGCGACG ATGCAAGGAC CCGCATCGTC ATCGATTTCG ATCGCGAACC GCGCTTCTCG
GTGCACTATA TCGCCAATCC GGAACGGATC GTCATCGATC TGCCGGCAAC CGCCTTCGGT
TTTCCGGCCA AGGATCTCGC CGCCCGCGGC CTGTTCAAGG ATATCCGTTA CGGCAAGATG
GACGAGGAAA GCGCCCGCAT CGTCCTGACG ACGGCAGGGC CGGTGAAGCT GGCGCTCGCC
AAGGTGCAGG CCGACGAGGC CGGCAAGGGG CATCGTCTCG TGCTCGATGC CGAGATGATC
GACAAGCAGG CCTTTTCGGA GCTGGTGAAA ACGCAATCCT GGAGCGATCG AGCCTCGACC
GATCAGGCCG ATGCGGCCCA GACGACGAGC GCCATTCCGG CACCTGAGAA AGCCGCCCCC
GGCGATTTCG TCATCGCCGT CGACGCCGGT CATGGCGGCA TCGATACCGG CGCGATCGGG
GTCGATACCA AAACCGAGGA AAAGCAGGTG ACGCTTGCCT TCGCCAAGGC CCTGACCGAG
CGGCTGAACA AGGAGCCGGG CATCAAGGCT TTCCTGACGC GCGAAGATGA CGAGTTCCTG
TCGCTGTCGC AGCGTGTGCT GATCGCCCGC CAGAACCATG CCGGGTTGTT CATTTCGCTG
CATGCCGACA CGCTGAAGCA GAAGGATATC CGCGGCGCCA CCGTCTACAC CATCTCCGAC
AAGGCCTCCG ACAAGCTCGC CGCCGACCTT GCCGAACGCG AAAACCTCTC CGACCAGATT
GCCGGCAAGG AGACGGTCGC CGAGCCGCCC GAGGTCGCCG ATATCCTGCT CGATCTGACC
CGGCGCGAGA CCCAGGCCTT CTCGATCTCG CTCGCCGAGA GCGTGCTGAA TTCTTTCAAG
GACCAGGTCG GCACCATCAA CAATCCGCAC CGTCATGCCG GTTTCCGCGT GCTGCAGGCC
CCCGACGTGC CGTCGATCCT CCTCGAGCTC GGCTTCCTCT CGAATGCCGA CGATGAGAAA
CTGCTGCTCG ACGAGACCTG GCGCGGCAAG ATCGTCGGTC TTTTGACCGA CGCAGTGAAG
CGCTACCGCG CCGCCGTCAT CGCGAATGGC GGCTGA
 
Protein sequence
MQIGCGGFLF KRARIAAKSA GRRSTFARRI LTALLAVGLL SAVAGSVTAG DPLLAYGARI 
VGDDARTRIV IDFDREPRFS VHYIANPERI VIDLPATAFG FPAKDLAARG LFKDIRYGKM
DEESARIVLT TAGPVKLALA KVQADEAGKG HRLVLDAEMI DKQAFSELVK TQSWSDRAST
DQADAAQTTS AIPAPEKAAP GDFVIAVDAG HGGIDTGAIG VDTKTEEKQV TLAFAKALTE
RLNKEPGIKA FLTREDDEFL SLSQRVLIAR QNHAGLFISL HADTLKQKDI RGATVYTISD
KASDKLAADL AERENLSDQI AGKETVAEPP EVADILLDLT RRETQAFSIS LAESVLNSFK
DQVGTINNPH RHAGFRVLQA PDVPSILLEL GFLSNADDEK LLLDETWRGK IVGLLTDAVK
RYRAAVIANG G