| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1294 |
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| Symbol | |
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| ID | 6980018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 1314040 |
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| End bp | 1316412 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643396011 |
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| Product | ribonuclease R |
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| Protein accession | YP_002280814 |
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| Protein GI | 209548897 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.501938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00167989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCAGAA TACCGCGCGA CAGAACGAAC CCTGCGGGCA AGCGCCCGGG CAAGATCGGC
CGTGCCGGCA AGGATGCTCC CGCCGTCGAG CCGCTGAACA TCGTCCACGG CGCGCTGCCG
TCGCGGGAGG TGATCCTGCG CTTCATCGCC GATCATCCGC AGAAAGCGTC CAAGCGGGAA
CTCGCCAAGG CTTTCGGCCT GAAGGGCGAC AGCCGCGTCG AGCTCAAGCA CCTGCTGCAG
GAGCTCGAGC AGGAAGGCAT GCTGCAGAAG AACCGCAAAT CGCTGATCCG CCCCGGCGCG
CTGCCGCCGG TCACCGTTCT CGATATCACC ACGCGTGACA AGGATGGCGA CCTGATCGGC
CGGCCGGCGG AATGGCCCGA GGATCAGGGT GTCGCGCCCG CCGTCGCCAT CCGCCAGCAA
TCGCCCGCAG GCCGCCAGGG CAAAGGCAAG GCACCGGTCG CCGGCCTCGG CGACCGCATT
CTGGCGAAGA TCTTCCCGGC CGTCGATCGT GCCGGGCCGG CCTATACGGC GCGGATCATC
AAGGTGATCG ACAAGCGCCG CGGCGCCTCG ATGGGCGTTT TCCGCACGAC GCCTGGCGGC
GGCGGCCGGC TGCTGCCGAT CGAGCGACGC GGCGAGGAGA TGGTCATCGA TCCAGACTTC
ACCGGCGGCG CCAAAGACGG CGACCTGGTC GAGATCGAAG TCGCCCGTCT CGGGCGCTTC
GGCCTGCCGC GCGCCAAGGT GCTTTCGGTC GTTGGCTCCG TCGGCTCGGA AAAGGCGATC
TCGATGATTG CCATCCATGC GCACGGCATT CCGCATGTCT TCCCACCCGC CGTTATCGCT
GAGGCCGAGG ATGCAAAACC CGCGACGATG TCGCATCGCG AGGACTGGCG CGACGTGCCG
CTGATCACCA TCGATCCGGC CGATGCCAAG GACCATGACG ACGCCGTCTA TGCCGAACTC
GACCCCTCGC CCGACAATCC CGGCGGCGTC ATCGTCACCG TGGCGATTGC CGACGTCTCC
TGGTATGTCC GCCCGAAGTC GCCGCTCGAC CGCGAGGCGC TGAAGCGCGG CAACTCGGTC
TATTTCCCGG ATCGCGTCGT ACCGATGCTG CCGGAGCGCA TTTCCAACGA TCTCTGCTCG
CTGAAGGAAG GCGTCGACCG CCCGGCGCTT GCCGTGCGCA TGAGCTTTTC CGGGGAAGGC
CGCAAGATCG GCCACACGTT TCATCGCGTC ATGATGAAGA GCGCGGCCAA ACTCTCCTAC
CAGCAGGCGC AGGCGGCGAT CGACGGCGCG CCGGACGATA GGACCGGACC GATGCTCGAG
CCGATCCTGA AGCCGCTCTG GCACGCCTAT GCGGTGATGA AGCGCGGACG CGATCGGCGC
CAGCCGCTGG AACTCGACAT GCCGGAGCGC AAGATCCTGC TGAAGCCCGA CGGCACCGTC
GACCGGGTCC ACGTGCCGCC GCGGCTCGAC GCTCACAAGC TGATCGAAGA GATGATGATC
CAGGCGAACG TCTCGGCCGC CGAGACGCTG GAAAAGAAAC GCCAGCCGCT GATCTACCGC
ATCCATGACG GCCCGACGCT TGCCAAGCAG GAAATCCTGC GCGAGTTCCT GGCGACGCTC
GGCATCCCGC TTGCCAAGGG CGGCAATATG CGCGCCAACA ACTTCAACGG CATTCTGGCG
AAGGCGGACG GCACGCCGCA CCAGACCATG GTCAACGAGA TGGTGCTGCG CTCGCAGAGC
CAGGCGATCT ACGGCCCGGA AAATATCGGC CATTTCGGCC TCAACCTGAT GAAATACGCG
CATTTCACCT CGCCGATCCG CCGTTACGCC GATCTCATCG TGCATCGCGC CCTCGTCGGC
TCGCTCGGCT TCGGCGAAGG CGGCATCACG ACAGAGGAAG AGGCAGGCCT CGACGATATC
GCCGCGGAAA TTTCGACCTT CGAGCGACGG GCCATGGCGG CCGAGCGTGA GACGGTCGAC
CGGCTGATCG CGCATCATCT GAGCGGCCGC GTCGGCGAGG AATTTGCCGG GCGGGTCTCG
GGTGTTACGA AATCCGGGCT GTTTGTCGCC CTGCCGGAGT ATGGTGCCGA TGGTTTCGTC
CCCATATCGA CGCTCGGCAG CGACTATTTC ATCTATGACG AGGCGCATCA GGCGCTCTCG
GGTGAACGGA CGGGGCTCGG CTATCGCCTT GGCGACAACG TCACGGTGAA GCTTGCCGAA
TCAATCCCGC TTGCCGGCGC GCTGCGCTTC GAGATGGTCA GCGAAGGGCG CGAGATGCCG
ACGGCGGTGC GCTCCTTCCA CAAAGCCGGC CGCCGCGACC GGGGCCAGGT TCGCAAGAAG
CCGGGAACGA GGCCACCGCG CGGGCGGCAT TGA
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| Protein sequence | MSRIPRDRTN PAGKRPGKIG RAGKDAPAVE PLNIVHGALP SREVILRFIA DHPQKASKRE
LAKAFGLKGD SRVELKHLLQ ELEQEGMLQK NRKSLIRPGA LPPVTVLDIT TRDKDGDLIG
RPAEWPEDQG VAPAVAIRQQ SPAGRQGKGK APVAGLGDRI LAKIFPAVDR AGPAYTARII
KVIDKRRGAS MGVFRTTPGG GGRLLPIERR GEEMVIDPDF TGGAKDGDLV EIEVARLGRF
GLPRAKVLSV VGSVGSEKAI SMIAIHAHGI PHVFPPAVIA EAEDAKPATM SHREDWRDVP
LITIDPADAK DHDDAVYAEL DPSPDNPGGV IVTVAIADVS WYVRPKSPLD REALKRGNSV
YFPDRVVPML PERISNDLCS LKEGVDRPAL AVRMSFSGEG RKIGHTFHRV MMKSAAKLSY
QQAQAAIDGA PDDRTGPMLE PILKPLWHAY AVMKRGRDRR QPLELDMPER KILLKPDGTV
DRVHVPPRLD AHKLIEEMMI QANVSAAETL EKKRQPLIYR IHDGPTLAKQ EILREFLATL
GIPLAKGGNM RANNFNGILA KADGTPHQTM VNEMVLRSQS QAIYGPENIG HFGLNLMKYA
HFTSPIRRYA DLIVHRALVG SLGFGEGGIT TEEEAGLDDI AAEISTFERR AMAAERETVD
RLIAHHLSGR VGEEFAGRVS GVTKSGLFVA LPEYGADGFV PISTLGSDYF IYDEAHQALS
GERTGLGYRL GDNVTVKLAE SIPLAGALRF EMVSEGREMP TAVRSFHKAG RRDRGQVRKK
PGTRPPRGRH
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