Gene Rleg2_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1292 
Symbol 
ID6980016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1312078 
End bp1313262 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content62% 
IMG OID643396009 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002280812 
Protein GI209548895 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0691449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0026922 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCAGC CGAGAAACGG CACACCGGGC GATGTCGAGG AAATCCATTG GCCTTCTCTG 
GTGGCAGCCA TCTCGTCGAT CTCAGCCGTT GGCATAGCAA TCGGCCTCGG GCTCCCGCTT
CTCAGCATCA TCCTGGAAAA ACGCGGCATC TCGTCCACAC TGATCGGGCT GAACACTGCG
ATGGCAGGCG TCGCCGCGAT GGCCGCCGCG CCCATCACCA CCCGGCTCGC GCATAAATAC
GGCGTTGCGC CGACCATGCT CTGGGCGGTG CTGATTTCGG CGCTGAGCGC GCTCGGTTTT
TATTATGCCC AGGATTTCTG GATGTGGTTT CCGCTGCGTT TCGCCTTTCA TGGCGCAACG
ACGACGCTGT TCATTCTCTC CGAATTCTGG ATCAATGCCG CCTCACCGCC GTCCAAGCGC
GGCTTCGTGC TCGGCATCTA TGCGACCGTG CTTTCCCTCG GCTTTGCGGC CGGGCCGCTG
TTGTTTTCGA TCCTTGGCAG CGACGGCATC TTCCCCTTCC TGATCGGCGC CGGTGCCATC
CTGCTGGCCG CCATTCCGAT CTTCATTGCC CGCGACGAGA GCCCGGTGCT TGAGGAAAAA
CCGGAACTGC ATTTCATGCG CTACGTTTTC CTTGTGCCGA CGGCAACGGC GGCGGTCTTC
ATCTTCGGCG CGGTCGAAGC GGGCGGCCTG TCGCTTTTCC CGATCTTTGC CGTGCGCGCC
CATTTCACCG AATCGCAGGC CGCACTTCTG CTCACCATGA TGGGCGTCGG CAACGTCATC
TTCCAAATCC CGCTCGGCCT GCTTTCCGAC CGCATCCCCG ACAAGCGGCC GCTTCTGGCC
GGCATGGCGC TGATGGGCTT CGTCGGCTCG ATGTTGCTGC CGCTGCTGGT CGACAACTGG
CTGCTGATGG CCGGGCTCCT GCTCTTCTGG GGCGGCTGCG TCTCCGGGCT CTATACGGTC
GGCCTCAGCC ATCTCGGCTC GCGGCTGACG GGTTCCGATC TTGCAGCGGC CAATGCCGCC
TTCGTCTTCT GTTATGCGAT GGGAACCGTG GCCGGGCCGC AGGCAATCGG TGCGGCGATC
GATGTCGCCG GAAATAACGG TTTTGCCTGG GCGATTGCCG CGTTCTTCGG CCTCTATGCC
CTACTTTCCG GCATCAGACT GATGTTCATT CGAAAACGGA CTTGA
 
Protein sequence
MSQPRNGTPG DVEEIHWPSL VAAISSISAV GIAIGLGLPL LSIILEKRGI SSTLIGLNTA 
MAGVAAMAAA PITTRLAHKY GVAPTMLWAV LISALSALGF YYAQDFWMWF PLRFAFHGAT
TTLFILSEFW INAASPPSKR GFVLGIYATV LSLGFAAGPL LFSILGSDGI FPFLIGAGAI
LLAAIPIFIA RDESPVLEEK PELHFMRYVF LVPTATAAVF IFGAVEAGGL SLFPIFAVRA
HFTESQAALL LTMMGVGNVI FQIPLGLLSD RIPDKRPLLA GMALMGFVGS MLLPLLVDNW
LLMAGLLLFW GGCVSGLYTV GLSHLGSRLT GSDLAAANAA FVFCYAMGTV AGPQAIGAAI
DVAGNNGFAW AIAAFFGLYA LLSGIRLMFI RKRT