Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1292 |
Symbol | |
ID | 6980016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1312078 |
End bp | 1313262 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643396009 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002280812 |
Protein GI | 209548895 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0691449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0026922 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCAGC CGAGAAACGG CACACCGGGC GATGTCGAGG AAATCCATTG GCCTTCTCTG GTGGCAGCCA TCTCGTCGAT CTCAGCCGTT GGCATAGCAA TCGGCCTCGG GCTCCCGCTT CTCAGCATCA TCCTGGAAAA ACGCGGCATC TCGTCCACAC TGATCGGGCT GAACACTGCG ATGGCAGGCG TCGCCGCGAT GGCCGCCGCG CCCATCACCA CCCGGCTCGC GCATAAATAC GGCGTTGCGC CGACCATGCT CTGGGCGGTG CTGATTTCGG CGCTGAGCGC GCTCGGTTTT TATTATGCCC AGGATTTCTG GATGTGGTTT CCGCTGCGTT TCGCCTTTCA TGGCGCAACG ACGACGCTGT TCATTCTCTC CGAATTCTGG ATCAATGCCG CCTCACCGCC GTCCAAGCGC GGCTTCGTGC TCGGCATCTA TGCGACCGTG CTTTCCCTCG GCTTTGCGGC CGGGCCGCTG TTGTTTTCGA TCCTTGGCAG CGACGGCATC TTCCCCTTCC TGATCGGCGC CGGTGCCATC CTGCTGGCCG CCATTCCGAT CTTCATTGCC CGCGACGAGA GCCCGGTGCT TGAGGAAAAA CCGGAACTGC ATTTCATGCG CTACGTTTTC CTTGTGCCGA CGGCAACGGC GGCGGTCTTC ATCTTCGGCG CGGTCGAAGC GGGCGGCCTG TCGCTTTTCC CGATCTTTGC CGTGCGCGCC CATTTCACCG AATCGCAGGC CGCACTTCTG CTCACCATGA TGGGCGTCGG CAACGTCATC TTCCAAATCC CGCTCGGCCT GCTTTCCGAC CGCATCCCCG ACAAGCGGCC GCTTCTGGCC GGCATGGCGC TGATGGGCTT CGTCGGCTCG ATGTTGCTGC CGCTGCTGGT CGACAACTGG CTGCTGATGG CCGGGCTCCT GCTCTTCTGG GGCGGCTGCG TCTCCGGGCT CTATACGGTC GGCCTCAGCC ATCTCGGCTC GCGGCTGACG GGTTCCGATC TTGCAGCGGC CAATGCCGCC TTCGTCTTCT GTTATGCGAT GGGAACCGTG GCCGGGCCGC AGGCAATCGG TGCGGCGATC GATGTCGCCG GAAATAACGG TTTTGCCTGG GCGATTGCCG CGTTCTTCGG CCTCTATGCC CTACTTTCCG GCATCAGACT GATGTTCATT CGAAAACGGA CTTGA
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Protein sequence | MSQPRNGTPG DVEEIHWPSL VAAISSISAV GIAIGLGLPL LSIILEKRGI SSTLIGLNTA MAGVAAMAAA PITTRLAHKY GVAPTMLWAV LISALSALGF YYAQDFWMWF PLRFAFHGAT TTLFILSEFW INAASPPSKR GFVLGIYATV LSLGFAAGPL LFSILGSDGI FPFLIGAGAI LLAAIPIFIA RDESPVLEEK PELHFMRYVF LVPTATAAVF IFGAVEAGGL SLFPIFAVRA HFTESQAALL LTMMGVGNVI FQIPLGLLSD RIPDKRPLLA GMALMGFVGS MLLPLLVDNW LLMAGLLLFW GGCVSGLYTV GLSHLGSRLT GSDLAAANAA FVFCYAMGTV AGPQAIGAAI DVAGNNGFAW AIAAFFGLYA LLSGIRLMFI RKRT
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