Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1272 |
Symbol | |
ID | 6979996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1288093 |
End bp | 1290093 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643395989 |
Product | NADH dehydrogenase subunit L |
Protein accession | YP_002280792 |
Protein GI | 209548875 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.288124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCTCT ATAAGGCTAT CGTCTTTCTT CCCTTGATCG GTGCGATCGT TGCCGGCCTG TTCGGCCGCG CCATCGGCGC CAAGGCTTCG GAATATGTCA CCAGCGGCCT GATGATCATC GCCGCCATCC TCTCCTGGAT CGTGTTCTTC ACGGTCGGCA TGGGCCATGC CGAAGGCGGC CCGATCAAGG TCGAGGTGCT GCGCTGGATC CAGTCCGGCG GCATCGACGT CTCCTGGTCG CTGCGCGTGG ATACGCTGAC CTCCGTCATG CTGATCGTCG TCAACACGGT CTCGACGCTG GTTCACGTCT ATTCGATCGG TTACATGCAC ACCGATCCGC ATCGCCCGCG CTTCTTTGCC TATCTCTCGC TCTTCACCTT CGCCATGCTG ATGCTGGTGA CGGCCGACAA CCTGGCGCAG ATGTTCTTCG GCTGGGAAGG CGTCGGTCTC GCCTCCTATC TGCTGATCGG CTTCTGGTTC AAGAAGCCGT CGGCAACGGC TGCGGCGATG AAGGCCTTCA TCGTCAACCG CGTCGGCGAC TTCGGCTTCG TCCTCGGCAT TGCCGGTGTC TTCGTGCTGT TCGGTTCGAT CAACTTCGAC ACGATCTTCG CCAATGCCTC GAACTTCGCC CCGCATGAAG GCGGCGGCGA GGCGAGCGAA GTCATCCTCA ACCTCTTCGG CATGCAGCTC GACAAGGCGC ACGCGCTGAC CGGCGTCTGC CTGCTGCTGT TCATGGGCGC CATGGGCAAG TCGGCGCAGT TCCTGCTCCA TACCTGGCTG CCGGATGCCA TGGAAGGCCC GACCCCGGTC TCGGCCCTCA TCCATGCCGC CACCATGGTC ACCGCCGGCG TCTTTCTCGT CGCCCGCATG TCGCCGCTCT TCGAACTGTC GCCGGATGCG CTCGTCGTCG TCACCGTGAT CGGCGCGATC ACCGCCTTCT TCGCGGCCAC CGTCGGCCTC GTGCAGAACG ACATCAAGCG CGTCATCGCC TATTCCACCT GCTCGCAGCT CGGCTACATG TTCGTGGCGC TCGGGGTAGG GGCCTATGGC GCGGCGATCT TCCATCTGTT CACGCACGCC TTCTTCAAGG CGCTGCTGTT CCTTTGCGCC GGCTCGGTCA TCCATTCCGT CGATGGCGAG CAGGACATGC GCTACATGGG CGGCCTGTAT CCGCATATCA AAGTTACCGG CATCCTGATG ATCATCGGCA CGCTGGCGAT CACCGGCGTC GGCATTCCGT TCACGCCGAT CGGCTTTGCC GGCTTCTTCT CCAAGGACGT GATCATCGAG GCGACCTATG CTTCGCATTC GCCGGTTGCA GGCTTTGCTT TCTCGCTGCT GGTCATCGCG GCTCTGTTTA CGAGCTTCTA TTCCTGGCGC CTGATCTTCA TGACCTTCTT CGGCAAGCCG CGCGCTTCGC ACGAGGTCAT GCACCACGTC CATGAATCGC CGCAGGTCAT GCTGGTGCCG CTCTATCTCC TGGCGATCGG CGCCGTGTTT GCCGGCGTGA TCTTCGAAGG CCGGTTCTAC GGCGAGGAAT ATGCCGAGTT CTGGAAGGGC GCGCTGTTTA CCGGCGCCGA GAACGAACTG GTCGAACAGT TCCATCACGT GCCGGCGCTC GTGGGCCTGA GCCCCTTCAT TGCCATGCTG CTCGGCTTCG TCCTCGCCTG GTACATGTAT ATCCGTTCGC CGCAGACGCC GCGCACCCTC GCCAGGCAGC ACCGCGTTCT CTACCAGTTC CTGCTGAACA AGTGGTACTT CGACGAACTC TACGATTTCC TCTTCGTCCG CACCGCCAAG GCGCTTGGCC GCTTCCTGTG GAAGAAGGGT GATGTCGGCG TCATCGACAC CTATGGCCCG AACGGTGTGG CCGCCCGGGT CGTCGCCGTC ACCGACCGCG TCGTCCGCCT GCAGACCGGT TACCTCTATC ACTATGCCTT CGCGATGCTG ATCGGCATTG CGGCGCTTGT TACCTGGATG ATGCTCGGGA GTTCCTTCTG A
|
Protein sequence | MFLYKAIVFL PLIGAIVAGL FGRAIGAKAS EYVTSGLMII AAILSWIVFF TVGMGHAEGG PIKVEVLRWI QSGGIDVSWS LRVDTLTSVM LIVVNTVSTL VHVYSIGYMH TDPHRPRFFA YLSLFTFAML MLVTADNLAQ MFFGWEGVGL ASYLLIGFWF KKPSATAAAM KAFIVNRVGD FGFVLGIAGV FVLFGSINFD TIFANASNFA PHEGGGEASE VILNLFGMQL DKAHALTGVC LLLFMGAMGK SAQFLLHTWL PDAMEGPTPV SALIHAATMV TAGVFLVARM SPLFELSPDA LVVVTVIGAI TAFFAATVGL VQNDIKRVIA YSTCSQLGYM FVALGVGAYG AAIFHLFTHA FFKALLFLCA GSVIHSVDGE QDMRYMGGLY PHIKVTGILM IIGTLAITGV GIPFTPIGFA GFFSKDVIIE ATYASHSPVA GFAFSLLVIA ALFTSFYSWR LIFMTFFGKP RASHEVMHHV HESPQVMLVP LYLLAIGAVF AGVIFEGRFY GEEYAEFWKG ALFTGAENEL VEQFHHVPAL VGLSPFIAML LGFVLAWYMY IRSPQTPRTL ARQHRVLYQF LLNKWYFDEL YDFLFVRTAK ALGRFLWKKG DVGVIDTYGP NGVAARVVAV TDRVVRLQTG YLYHYAFAML IGIAALVTWM MLGSSF
|
| |