| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1232 |
|---|
| Symbol | |
|---|
| ID | 6979953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1245396 |
|---|
| End bp | 1246586 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643395946 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_002280752 |
|---|
| Protein GI | 209548835 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.104179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTATC CGAAAATTCC GTCCTGGACG TATTCCGTGC CGGCGACGTT GTTGCTGATG
GCGCCTTTCG ACATCCTGGC CTCGCTTGCA ATGGACATCT ATCTGCCGGT TGTGCCGACC
ATGCCGCAGG CGCTTGGCAC CTCGCCTGCC GTCATTCAAT TGACCCTTAG CCTTTACATG
CTTGTGCTTG GCGTCGGGCA GATCGTCTTT GGACCGATCT CCGATATCGT TGGGCGGCGG
CCCGTTCTGC TCGGCGGGGC GGCACTCTTT GCCGTTTCCT CCTTCCTACT TGCCGGAACC
TCATCGGCCT CTCTCTTCAT GGCCCTGCGA TTGCTGCAGG CCATCGGCGC CTCGGCGGCG
CTGGTCGCCA CTTTCGCAAC GGTGCGTGAC GTTTATGCCG AACGCCCGGA AAGCAGCGTG
ATCTATAGCC TGCTTGGTTC CATGCTGTCC TTTGTGCCCG CATTCGGGCC GATCGTTGGA
GCGGTGATCG CGGATCGGTA CGGGTGGCGA GCCATCTTCG TCATCATCGG CGTGCTTTCG
GTCGTCGCAA TTCTCAACGC CGGCATGCGG TGGCATGAAA CCCGCCCTGC CGCCGCCACG
GCGACCATCT CGTTCCGGCC GATTCTGACC AGCTTTCCGT TCTGGGTCTA CACAAGCGGC
TTCAGCGCGG CGATGGGAGC CTTCTTCGTC TTCTTCTCGA CGGCACCTCG CATCCTGATC
GATCAATCCG GTTTTTCCGG CATCACCTTC AGCTTCATCT TTGCCTCGGT GGCTTTGGTG
ATGATCGTGA CGGCGCGCTT TGCCAAAGGC TTCGTCACGC GCTGGGGTAT CGCAGGCAGC
CTTGCCAGAG GCATGGCGAT GTTGCTTCTC GGCGCCGTGA TGCTTGCCGC GGGAGAGATG
TTTCTGCAGG CACCCCTCAT CGGCTTCGTC CTGCCGATGT GGATCATCGC GATCGGCATC
GTCTTTGCGA CGGCGGTCAC CGCCAATGGT GCACTCAAGG CGTTCGACGA TACCGCCGGA
ACGGCGGTGG CGCTCTATTT CTGCATCGAA AGCCTGCTGG TCGGGGTCGC AGGCACCTTG
TTCGTCGTAT TGCTCGACGG CGACACCGCC TGGCCGCTGG CAGCTTATGC CGCCGTGACG
GCGCTGATCA CCCTTGCCGG ATTGCGGCGG CTTTCGTGCA AGACAGCCTG A
|
|---|
| Protein sequence | MSYPKIPSWT YSVPATLLLM APFDILASLA MDIYLPVVPT MPQALGTSPA VIQLTLSLYM
LVLGVGQIVF GPISDIVGRR PVLLGGAALF AVSSFLLAGT SSASLFMALR LLQAIGASAA
LVATFATVRD VYAERPESSV IYSLLGSMLS FVPAFGPIVG AVIADRYGWR AIFVIIGVLS
VVAILNAGMR WHETRPAAAT ATISFRPILT SFPFWVYTSG FSAAMGAFFV FFSTAPRILI
DQSGFSGITF SFIFASVALV MIVTARFAKG FVTRWGIAGS LARGMAMLLL GAVMLAAGEM
FLQAPLIGFV LPMWIIAIGI VFATAVTANG ALKAFDDTAG TAVALYFCIE SLLVGVAGTL
FVVLLDGDTA WPLAAYAAVT ALITLAGLRR LSCKTA
|
|---|
| |