| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1222 |
|---|
| Symbol | |
|---|
| ID | 6979943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1233838 |
|---|
| End bp | 1235403 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643395936 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_002280742 |
|---|
| Protein GI | 209548825 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.957103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC TGGAAAAAGG CGATCAATTC GACGTGGAAG CACTGCGCAA GCAGGTCTCC
GACATCGAAG TGCGCGGCAA TGCGGGTCAG GAAAAATCGT CCGACCCGAC TGAAATCAAT
CCCTATGCCC GGCAGATCGC CGAACAGTTC CGTGACGGAA CCAAGTCGCC GGTGATCATC
ATCGGGCAGT TGCGGCTGCT GGAATTCCTG GCGCTCTTCG CGATCGCCCT GATCGCCCAC
TATTTTTGGC CCGGCGACGG CTACGATTCA TCGCTGGTGC GAACCGGCAT GGCGGCGATC
GCCTCTGCCC TGACGGTCAT CGGCCTGCAG CTTGGCGACA CCTACACGAT TCCGGCACTT
CGGGCCAAGC TGCGGCTGAT CCCCCGCATC CTGGGCTCGT GGACGGTCGC GCTCCTCCTG
ACCGTCGGCC TGTTCGCGCT GGTTCGCGGC AGCACATGGG CGATGGTCGC CGACGCCTAT
CTGCCCTGGT TTGCGTCTGG CGCGCTCTTC CTGGCGGCCG AGCGTTTCCT CGTCGCCTAC
GGCATCCGCA ACTGGGCGCG CAACGGCATC ATGGAGCGCC GCGCCGTGAT CGTCGGCGGC
GGCGAGCCGG CCAAGGAACT GATCCGCATC CTCGAGCAGC AGGATGACAA TGACATCCGC
ATCTGCGGCA TCTTCGACGA TCGCGGCGAA AAGCGCTCGC CGATCATGGT CGCCGGTTAT
CCGAAGCTCG GCACCGTGGC CGAACTGGTC GAATTCGTGC GATTGACGCG CATCGACATG
CTGATCATCG CTCTGCCGCT TTCGGCCGAG GCGCGTATCT ACGACCTTTT GAAGAAGCTC
TGGGTTCTGC CGGTCGATAT CCGCCTTGCC GCGCATGCCA ACCGGCTGCG CTTCCGGCCG
CGCGCCTATT CGCATGTCGG CACGGTGCCG ATGCTCGACA TTTTCAAGAT GCCGATCCGC
GACTGGGATT CCGTTGCCAA GCGCGGCTTC GACATCTTCT TCACCGTAAT CGCGCTGGCG
CTGCTCTGGC CGCTGATGGT CGCGACCGCC ATCGCCATCA AGGTGACCTC CGAAGGCCCG
GTTTTCTTCA TGCAGAAGCG CCACGGCTTC AACAATGAAA TCATCAACGT CTTCAAGTTC
CGTTCGATGT ACACCAACAT GTCCGACCCC ACGGGCAAGG CTGCGGTGAC CAAGGGCGAT
CCGCGCGTCA CCCGCGTCGG CCGCTTCATC CGCAAGACCT CGATCGACGA ATTGCCGCAG
CTTTTCAACG TGCTGAGGGG CGAGCTTTCG CTGGTCGGGC CGCGCCCGCA TGCCGTTCTC
GCCCAGGCCC GTGACCGCGC CTTCGGCGAT GTCGTCGAGG GCTATTTCGC CCGCCACCGC
GTCAAGCCAG GGGTCACCGG CTGGGCGCAG ATCAACGGCT GGCGCGGCGA AGTGGACAAT
GACGAGAAGA TCAAGTTCCG CACCGCCTAC GACCTCTATT ACATCGAGAA CTGGTCGCTC
TGGTTCGATC TCAAGATCCT GTTCCTGACG CCGATCCGGC TGCTCAACAC GGAAAATGCC
TATTGA
|
|---|
| Protein sequence | MNKLEKGDQF DVEALRKQVS DIEVRGNAGQ EKSSDPTEIN PYARQIAEQF RDGTKSPVII
IGQLRLLEFL ALFAIALIAH YFWPGDGYDS SLVRTGMAAI ASALTVIGLQ LGDTYTIPAL
RAKLRLIPRI LGSWTVALLL TVGLFALVRG STWAMVADAY LPWFASGALF LAAERFLVAY
GIRNWARNGI MERRAVIVGG GEPAKELIRI LEQQDDNDIR ICGIFDDRGE KRSPIMVAGY
PKLGTVAELV EFVRLTRIDM LIIALPLSAE ARIYDLLKKL WVLPVDIRLA AHANRLRFRP
RAYSHVGTVP MLDIFKMPIR DWDSVAKRGF DIFFTVIALA LLWPLMVATA IAIKVTSEGP
VFFMQKRHGF NNEIINVFKF RSMYTNMSDP TGKAAVTKGD PRVTRVGRFI RKTSIDELPQ
LFNVLRGELS LVGPRPHAVL AQARDRAFGD VVEGYFARHR VKPGVTGWAQ INGWRGEVDN
DEKIKFRTAY DLYYIENWSL WFDLKILFLT PIRLLNTENA Y
|
|---|
| |