| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1179 |
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| Symbol | |
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| ID | 6979899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1190345 |
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| End bp | 1191559 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643395892 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002280699 |
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| Protein GI | 209548782 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.403789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.30811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA CGCCGCATGA CGAGAGTTTC ATGGCGGCGG CGATCCGCCT GTCGCGCCGG
CATCTCGGCC GCACCGCCAC CAACCCCTCC GTCGGTTGCC TGATCGTCAG GGACGGTGTC
GTCGTCGGCC AGGCTGTCAC CGCCGTCGGC GGCCGCCCGC ATGCCGAGCC GCAGGCGCTC
GCCGAAGCAG GCGCTGCTGC CCGCGGCGCC ACAGCCTATG TGACGCTCGA ACCCTGCTCG
CATCACGGTA AGACCCCCCC TTGCGCCGAG GCGCTGATCG CCTATGGCGT TGCCCGTGTC
GTCATCAGCG TCACCGATCC CGATCCACGC GTCTCCGGCC GTGGTATCGC CATGCTGCGG
GAAGCCGGTA TCGAGGTGGA TGCCGGCGTG CTGGAGGCGG ATGGACGGCG TTCGCTTGCC
GGCTATCTCA CCCGCCAGAC GAAGAACCGG CCTTATGTGA CTCTCAAACT TGCCGTTTCC
GCCGACGGCA TGATTGGCCG CGAGGGCGCG GGGCAGGTGG CGATAACCGG TCCGGAGGCC
CGCGCCGAGG TTCAGGCGCT GCGCGCCGAA ACCGACGCGA TCCTTGTCGG CATCGGCACC
GCAATATCAG ATGATCCGCT GCTGACGGTT CGGACACCAG GCCTTGAGGC TCAGTCCCCC
ATCCGCATCG TGCTCGATCC CTCGCTGGCC CTGCCGCTGA CGAGCAAGCT GGTTCAGACG
GCGCGCGATG TCCCGGTGAT CGTGGTGGCG AGTGAAGAGA TTTCGCCATC AGGGTCAGAG
GAAGGGTTAT CCCCCTCTGC CCTGGGAGCT AACCCCCAGC CAATCTCCCC CCTTGTGGGG
GAGATGTCCG GCAGGACAGA GGGGGGTGCC ACACTCCCCG CCGCTGCTAT GGACCTGGAC
TCCCGCCGCA CCGCTCTCGA AGCCGCCGGT GTCGAGATCG TCTACTGCAA TCCCTATCAT
CCGGAAATCC TGCTGCCGGC CTTGGCAACA CGCGGTATTT CCTCGCTTCT GGTCGAGGGC
GGCGCCAAGA CCGCCCGGCT TTTTCTCGAG GCTGGCCTCG TCGACCGCAT TCAGCTTTAC
CAGGCGCCTG TGGTCATCGG CGAGGGCGGT ATTGAATCGC CGCTTGATGC AACCGACATA
CCACCGGGTT TTGCCCAGAC GGGCACGCAG ATGTTCGGCG AAGATCGCCT GGACGAATAC
GAAAGAGGGC TTTGA
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| Protein sequence | MSVTPHDESF MAAAIRLSRR HLGRTATNPS VGCLIVRDGV VVGQAVTAVG GRPHAEPQAL
AEAGAAARGA TAYVTLEPCS HHGKTPPCAE ALIAYGVARV VISVTDPDPR VSGRGIAMLR
EAGIEVDAGV LEADGRRSLA GYLTRQTKNR PYVTLKLAVS ADGMIGREGA GQVAITGPEA
RAEVQALRAE TDAILVGIGT AISDDPLLTV RTPGLEAQSP IRIVLDPSLA LPLTSKLVQT
ARDVPVIVVA SEEISPSGSE EGLSPSALGA NPQPISPLVG EMSGRTEGGA TLPAAAMDLD
SRRTALEAAG VEIVYCNPYH PEILLPALAT RGISSLLVEG GAKTARLFLE AGLVDRIQLY
QAPVVIGEGG IESPLDATDI PPGFAQTGTQ MFGEDRLDEY ERGL
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