Gene Rleg2_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1170 
Symbol 
ID6979890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1180073 
End bp1181179 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content58% 
IMG OID643395883 
Productintegrase family protein 
Protein accessionYP_002280690 
Protein GI209548773 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.453741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.429636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT ACGACAAGAA GGAATATCGC GTCGGCAACT ACTGGCTCGG TCAACGGACC 
GGTAGTCCCG CGTGGTACCG GTGCTTTTAT GAAGATGGAA CCCGCCGCAC CAAGCGTGTG
ACCCTCGGCA CCGATGATTA TGAAGAAGCC AAGCGGCGTC TTGACGCTTG GTACATGGAC
CAGCGCATGA GGATCGCTCA GGATCTTTCG CCTACGGACG TGACCCTGAA AGAGGTTTTC
AAGGATTACC TCGACAACCA TGCCGTCAAT CTGCGCTCGT ACGAGAGCGT CAAGATCCTA
CTCCGGTATT GGGAAGAGCA TTGGGGCGAA AAGGCCTCCG TTGCCGATGT GCGCAATGTC
ATCGAACAGG AGAAGTTTCG GACGGCGCTC TTTGCCAAGG GTCTTGCCAT TAATTCAGTG
AACCGCACCC TCGAAGCGGG TAGGGCGGCA ATTCGGCGCG CGTTCAAGAG GAACGTCATT
TCCGCGATGC CCTTTGTGGA AATCCTCCCA TACGAGCGGG ACAAGCCCAA GGGTCGCCCG
CTGTCAGTCG AGGAAATCGG CAAGCTCTAC GCCGAGTGCG CCGATCACAT GCGGCTCTTC
ATGATCCTGA TGCTGGGTAC CGGCGCCCGC AATGAAGCTA TCTGCACCCT CACATGGGAA
CAGATCGATT TCGAGGCAGG CTTGATCTAT CTCAATCCAC CCGGCCGCAA GCAAACGTCC
AAACGTCGTC CTGTCGTGCG CATGACCCCG TTTGTTCGGG AGCAACTGAG CAAGTTCAAC
GATCGGGAAG GGCGCGTGCT GTCGTTCCGG GGGAAGTCGT TCCGAACGGC CCATCAGGGT
ATCGGAAAGG CCGTTGGTCG GGCGAAACTC AAGGGCAAGG TCACGCCGTA CTCTTTCCGT
CATACCGTAG CGCGGTGGCT GCGGAAGGAA GGGGTGAGCC CGTGGGAAGT TGGTGCCCAG
CTCGGGCACA AAATGCCGGG CTACAACATC ACGGAAATGT ACGCCTCGGC CTCGCCTGAT
TACCTCGAAA AGGCCGCCGA AGCGATTGAA AAGCTGCTGC GCACCGCTAT CCCGTTGGAT
GCCCCGCCAA TCCCGCAAGG GCGATAG
 
Protein sequence
MAKYDKKEYR VGNYWLGQRT GSPAWYRCFY EDGTRRTKRV TLGTDDYEEA KRRLDAWYMD 
QRMRIAQDLS PTDVTLKEVF KDYLDNHAVN LRSYESVKIL LRYWEEHWGE KASVADVRNV
IEQEKFRTAL FAKGLAINSV NRTLEAGRAA IRRAFKRNVI SAMPFVEILP YERDKPKGRP
LSVEEIGKLY AECADHMRLF MILMLGTGAR NEAICTLTWE QIDFEAGLIY LNPPGRKQTS
KRRPVVRMTP FVREQLSKFN DREGRVLSFR GKSFRTAHQG IGKAVGRAKL KGKVTPYSFR
HTVARWLRKE GVSPWEVGAQ LGHKMPGYNI TEMYASASPD YLEKAAEAIE KLLRTAIPLD
APPIPQGR