Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1170 |
Symbol | |
ID | 6979890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1180073 |
End bp | 1181179 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643395883 |
Product | integrase family protein |
Protein accession | YP_002280690 |
Protein GI | 209548773 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.453741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.429636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGT ACGACAAGAA GGAATATCGC GTCGGCAACT ACTGGCTCGG TCAACGGACC GGTAGTCCCG CGTGGTACCG GTGCTTTTAT GAAGATGGAA CCCGCCGCAC CAAGCGTGTG ACCCTCGGCA CCGATGATTA TGAAGAAGCC AAGCGGCGTC TTGACGCTTG GTACATGGAC CAGCGCATGA GGATCGCTCA GGATCTTTCG CCTACGGACG TGACCCTGAA AGAGGTTTTC AAGGATTACC TCGACAACCA TGCCGTCAAT CTGCGCTCGT ACGAGAGCGT CAAGATCCTA CTCCGGTATT GGGAAGAGCA TTGGGGCGAA AAGGCCTCCG TTGCCGATGT GCGCAATGTC ATCGAACAGG AGAAGTTTCG GACGGCGCTC TTTGCCAAGG GTCTTGCCAT TAATTCAGTG AACCGCACCC TCGAAGCGGG TAGGGCGGCA ATTCGGCGCG CGTTCAAGAG GAACGTCATT TCCGCGATGC CCTTTGTGGA AATCCTCCCA TACGAGCGGG ACAAGCCCAA GGGTCGCCCG CTGTCAGTCG AGGAAATCGG CAAGCTCTAC GCCGAGTGCG CCGATCACAT GCGGCTCTTC ATGATCCTGA TGCTGGGTAC CGGCGCCCGC AATGAAGCTA TCTGCACCCT CACATGGGAA CAGATCGATT TCGAGGCAGG CTTGATCTAT CTCAATCCAC CCGGCCGCAA GCAAACGTCC AAACGTCGTC CTGTCGTGCG CATGACCCCG TTTGTTCGGG AGCAACTGAG CAAGTTCAAC GATCGGGAAG GGCGCGTGCT GTCGTTCCGG GGGAAGTCGT TCCGAACGGC CCATCAGGGT ATCGGAAAGG CCGTTGGTCG GGCGAAACTC AAGGGCAAGG TCACGCCGTA CTCTTTCCGT CATACCGTAG CGCGGTGGCT GCGGAAGGAA GGGGTGAGCC CGTGGGAAGT TGGTGCCCAG CTCGGGCACA AAATGCCGGG CTACAACATC ACGGAAATGT ACGCCTCGGC CTCGCCTGAT TACCTCGAAA AGGCCGCCGA AGCGATTGAA AAGCTGCTGC GCACCGCTAT CCCGTTGGAT GCCCCGCCAA TCCCGCAAGG GCGATAG
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Protein sequence | MAKYDKKEYR VGNYWLGQRT GSPAWYRCFY EDGTRRTKRV TLGTDDYEEA KRRLDAWYMD QRMRIAQDLS PTDVTLKEVF KDYLDNHAVN LRSYESVKIL LRYWEEHWGE KASVADVRNV IEQEKFRTAL FAKGLAINSV NRTLEAGRAA IRRAFKRNVI SAMPFVEILP YERDKPKGRP LSVEEIGKLY AECADHMRLF MILMLGTGAR NEAICTLTWE QIDFEAGLIY LNPPGRKQTS KRRPVVRMTP FVREQLSKFN DREGRVLSFR GKSFRTAHQG IGKAVGRAKL KGKVTPYSFR HTVARWLRKE GVSPWEVGAQ LGHKMPGYNI TEMYASASPD YLEKAAEAIE KLLRTAIPLD APPIPQGR
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