| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1163 |
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| Symbol | |
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| ID | 6979883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1174666 |
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| End bp | 1176180 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643395876 |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_002280683 |
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| Protein GI | 209548766 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.552237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTCT GCTACGCCAT TACTTTATGG CCGCTCAGTA TTGTTTGTAA GTTTCTATGG
GCGCTTAGCG TCTCAATCAT CGTAAACATG TGGGGAGCGG TGCAATTCCC TCTTGCTGCT
TGGCGGAAAT ACAAGAATCC GCCTCAACCT ACCCATGGGA ACGCGAAGTA CGAAGACGAC
AAGAGCCTGC GAAAGCGTGG CTATCTCGGC AACCACGGCT TCCTCGCATG TGTCACCGAC
AAGGGCCGAA AGGTTTTCAC CAGTCCCGAG CGCACGGTGG TCATGCTGGC GCCTCCGGGC
TCCGGCAAAT CCCAGCACTT TCTTGCCGAT CTGAGGGCGA AGATGAAACG CCCGGACGAT
AAGCTTCCGC ACCTCATCAT CGGGGATGCA GCGGACGAGC TTTACCAGAA TTCTGCGAAG
GATCTTGCGG CAAGGGGCTA CCAGATATTC AAGATTGACT TGGTCGAACC GGAAGCATGG
TCAAAGTACG ATGTTCTCTC CGGGCTTGAC CCCTCCGTCA CGGCGGAGGT TCTTTTTGGA
CGGCAGTTGG ATGCCATTTG CAGATTGTTC GTCCCTGACG AGCCCCACAG CAAGCAGCCG
CACTTCTACG AATTCGCCCG CCTGATGGTG AAGTGCGCTA TCACGATCAA CGTGAAATAT
GAGGGCAACA ACAAGCCGAT CGGGGACATT CTCTCCGAGC TGATCGACGA AGACGGGCGG
GACGAGATGA TTAAGCGGTC GAAGAAGTAT GGCGATCCCA TCGTGACCTC GACGCTGAAG
GTGATGGCGA AGATGCAGGA CAAGCCGGAG GGGCTTTCCA TGATGTCCAC ATCCCTTCGA
AAGCTGGAAG GCTGGCTTGA TCCGGCTATC CGGGAAATTA CCGCCTTCGG AGAAGACATT
CACGGCAAAT ACAGTCGTGG CTGGCGGTTT GAGCAGATGC TGATGCACGA CAAGCCTGTT
GCCCTGTTCA TTCACAGTGG CACGAACGAG ACAGCGGCGG GGCCGATGGT TCGGCTGATC
TACGGCAACG CCATCAATGC GGTTTCAACG CTTCTCGATA CCGGCAAGGC GATGCCGCGA
GATCTGGAGG TGATGGTGGA TGAAGCCGGT CTTGCAGGCA ACTGCGCTGC GATTTCGCAC
GCCTATAACC GACTGCGTAA GGCGGGTGTC CGTATCCGCA TGTGTTTCCT CGGCTTAACG
GAATTCAAGG AGACGTATCC CAACGCTATG AAAATCCTGG CGGGCAGTGA CTTGGTGGTC
TTCGGTGGGT CTAATGAGCA GGATCTAAAC CAATATGCCA GCGACCTTGC GGGCGAATAC
ACAGTGCACA GTAAGAGCGA GAGCGAAAGC AGCAGCGGTG AGAGCAGGGG GAGGTCTGAG
CAGCCACGAC GCCTCATCAA GCCATCGGAG GTCCGTGGGC TTGCTTACGA TAAGGCGCTC
GTCTTCATCG ATAACCTTGT GGTCCTGGGC AAGAAGCCGT GGAGGAAAGG GAAGAACGGT
ATCGAGTTCC TATAA
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| Protein sequence | MGFCYAITLW PLSIVCKFLW ALSVSIIVNM WGAVQFPLAA WRKYKNPPQP THGNAKYEDD
KSLRKRGYLG NHGFLACVTD KGRKVFTSPE RTVVMLAPPG SGKSQHFLAD LRAKMKRPDD
KLPHLIIGDA ADELYQNSAK DLAARGYQIF KIDLVEPEAW SKYDVLSGLD PSVTAEVLFG
RQLDAICRLF VPDEPHSKQP HFYEFARLMV KCAITINVKY EGNNKPIGDI LSELIDEDGR
DEMIKRSKKY GDPIVTSTLK VMAKMQDKPE GLSMMSTSLR KLEGWLDPAI REITAFGEDI
HGKYSRGWRF EQMLMHDKPV ALFIHSGTNE TAAGPMVRLI YGNAINAVST LLDTGKAMPR
DLEVMVDEAG LAGNCAAISH AYNRLRKAGV RIRMCFLGLT EFKETYPNAM KILAGSDLVV
FGGSNEQDLN QYASDLAGEY TVHSKSESES SSGESRGRSE QPRRLIKPSE VRGLAYDKAL
VFIDNLVVLG KKPWRKGKNG IEFL
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