| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1075 |
|---|
| Symbol | |
|---|
| ID | 6979794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1095483 |
|---|
| End bp | 1097366 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643395787 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002280595 |
|---|
| Protein GI | 209548678 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000840512 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGC TCACCGATAT TTCCGCCCGC ATTGCCGGGC GCCTGCTTCT CGACAATGCC
AGCATTTCGC TGCCTTCGGG CACGAAGGCG GGGCTGGTCG GGCGCAACGG CGCCGGCAAG
TCGACCCTGT TTCGCGTCAT CACCGGCGAT CTCGGCTCGG AGACCGGATC GGTGTCGATC
CCGAAGGCGG CGCGCATCGG CCAGGTGGCG CAGGAAGCGC CGGCGACTGA GGAATCCCTG
ATCGAGATCG TGCTGTCAGC AGACAAGGAA CGCGCCGCCC TCGTTGCCGA GGCGGAAACG
GCGACCGATC CGCACCGCAT CGCCGAAATC CAGATGCGTC TCGTCGATAT CGACGCGCAT
TCGGCCGAAG CGCGCGCGGC AAGCATTCTG GCCGGCCTCG GCTTCGACCA GGCAGCGCAG
GCCCGCCCCG CCTCCTCCTT CTCAGGCGGT TGGCGCATGC GCGTGGCACT GGCCGCCGTG
CTGTTTTCCG AGCCGGATCT GCTGCTGCTC GACGAACCCA CAAACTATCT CGACCTCGAA
GGCACGCTGT GGCTGGAAGA TTATGTCCGG CGCTATCCGC ACACGGTCAT CATCATCAGC
CACGATCGCG ACCTCTTGAA CAACGCGGTC AACGCGATCG TCCATCTCGA CCAGAAGAAG
CTGACCTTCT ATCGCGGCGG CTACGACCAG TTCGAGCGGC AGAAGGCGGA AGCCGACGAG
CTGCAGACCA AGGCCAAGGC CAAGAACGAC GCGGCCCGCA AACATCTGCA GAGCTTCATC
GATCGCTTCA AGGCCAAGGC TTCCAAGGCC CGGCAGGCGC AATCGCGCGT CAAGGCGCTC
GAGCGCATGG GAACCGTCGC CGCGGTGATC GAAGACCACG TGCAGCCGAT CACTTTCCCC
GAGCCGGAAA AGCAGCCGGC CTCGCCGATC GTCGCGATCC AGAGCGGCGC CGTCGGTTAC
GAGCCCGGCA ATCCGATCCT GAAGAACCTC AACCTGCGGA TCGACAATGA CGACCGCATC
GCCCTGCTCG GCTCGAACGG CAACGGCAAA TCGACCTTCG CCAAATTCAT CTCCGGCCGG
CTTGCGCCGG AAAGCGGCGA AGTCAAGCTG GCGCCGAGCC TGAAGATCGG CTTCTTCGCG
CAGCATCAGC TCGACGACCT CATTCCCGAG CAATCGCCGG TCGAACATGT GCGCCGGCTG
ATGCCCGGCG CGCCGGAGCC CAAGGTGCGC GCTCGCGTCG CCCAGATGGG GCTTGCGACC
GAGAAGATGG CGACAGCCGC CAAGGATCTT TCCGGCGGCG AAAAGGCCCG CTTGTTGATG
GGGCTTGCCG CCTTCAATGC GCCCAATCTG CTGATCCTCG ACGAACCCAC AAACCACCTC
GATATCGATA GCCGCCGGGC GCTGATCGAG GCGCTGAACG ATTACGAAGG CGCCGTCATC
CTGATCTCGC ACGACCGACA TCTGATCGAG GCGACGGTCG ATCGGCTGTG GCTGGTCAAT
GGCGGCACGG TGACGACCTT CGAAGGCGAT ATGGACGAAT ATCGCGACCT GATCGTCACA
TCCGGTAAAA AAAAAGAAGA AAAGCCGCAG CTGACTGAAG ACGCGACATC GAAGGCCGAC
CAGCGCAAGC TCAATGCCGA ACGGCGCGCC TCGCTGACCC CGCTCAAGAA AAAGATCAAC
GAAATCGAAT CCTTGACGGC GAAGCTGGAG AAACAGATTC AGGCGCTTGA CGCAGAACTT
GCAAATCCCG CCCTTTACGA AAAGACGCCG GCCAAGGCCG CCGAGAAGGC AAAGCAGCGC
GGCGAGGCTG CAGCAAAACT GGCTGCCGCC GAGGAAGACT GGCTGATGCT TTCGGCCGAA
TACGAAGAAG CTATGGCGGG ATAG
|
|---|
| Protein sequence | MITLTDISAR IAGRLLLDNA SISLPSGTKA GLVGRNGAGK STLFRVITGD LGSETGSVSI
PKAARIGQVA QEAPATEESL IEIVLSADKE RAALVAEAET ATDPHRIAEI QMRLVDIDAH
SAEARAASIL AGLGFDQAAQ ARPASSFSGG WRMRVALAAV LFSEPDLLLL DEPTNYLDLE
GTLWLEDYVR RYPHTVIIIS HDRDLLNNAV NAIVHLDQKK LTFYRGGYDQ FERQKAEADE
LQTKAKAKND AARKHLQSFI DRFKAKASKA RQAQSRVKAL ERMGTVAAVI EDHVQPITFP
EPEKQPASPI VAIQSGAVGY EPGNPILKNL NLRIDNDDRI ALLGSNGNGK STFAKFISGR
LAPESGEVKL APSLKIGFFA QHQLDDLIPE QSPVEHVRRL MPGAPEPKVR ARVAQMGLAT
EKMATAAKDL SGGEKARLLM GLAAFNAPNL LILDEPTNHL DIDSRRALIE ALNDYEGAVI
LISHDRHLIE ATVDRLWLVN GGTVTTFEGD MDEYRDLIVT SGKKKEEKPQ LTEDATSKAD
QRKLNAERRA SLTPLKKKIN EIESLTAKLE KQIQALDAEL ANPALYEKTP AKAAEKAKQR
GEAAAKLAAA EEDWLMLSAE YEEAMAG
|
|---|
| |