Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1074 |
Symbol | |
ID | 6979793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1094512 |
End bp | 1095354 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643395786 |
Product | polysaccharide deacetylase |
Protein accession | YP_002280594 |
Protein GI | 209548677 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000250549 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTATCGCT TTTTCATTCT GTCCTGCATG GCCCTCACGG CCACCCTGTC TGCCTGCAGC ACCACCAAAC AGGCCCCGGA TACCTCGATC AAGACCTCCT CGGTGATCGC GCCCGCGGAG CGGAAACTTG CCTTTGCCGG CGACGATGCG GCGCCGCGCA TGAGCGGGTG GCACCAACTG GCCGGGCGGA CGCTTGAGGT CTCCTCGCTT GCCGATCTCA AGCTGCAGGA CAAGGAAGTG ATCCTGAGCT TCGATGACGG CCCGATCCCG GGGCGGACCG ACAAGGTTTT GGCGATCCTC GATCGGTTCG GCGTCAAGGG CGCCTTCATG ATGGTCGGCG AAATGGCCGA AATGCATCCG GCGCTGGCCC GCAGGGTCGC CGAGGACGGC AACACGATCG GCAGCCACAC CTACGACCAC GCCGACCTGA CTTCGCTTGA TTTCGACGCG GCAATGGCCG AGGTGGTCAA GGGCGAATTG GCGGTGACCA AGGCGACGGG AACCGACGTC TCCTTCTTCC GCTTCCCCTA TCTTGCCGAG AGCCACAGGC TGTGCGCCGC GATCGCCATG CGCGATCTGG TGGTCATGGA TGTCGATATC GACAGCAAGG ACTATTTCGC CATCACGCCG GCCTCGGTGA CGCAGCGGAC GATGGACCTG CTGCACAAAC GCGGCCGCGG CATCATCCTG ATGCATGACA TCCACAAACG CACGGCAACG ATGCTGCCGA CCCTGCTCTC CGAACTCGAA TCCGAAGGCT ACAAGGTGGT GACGCTGAAG CTCAAGAAGA CGCAGGCGCC GAGCAACCTC GTCGCTTCTG CCGATTTGGT GACGACCCGG TAG
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Protein sequence | MYRFFILSCM ALTATLSACS TTKQAPDTSI KTSSVIAPAE RKLAFAGDDA APRMSGWHQL AGRTLEVSSL ADLKLQDKEV ILSFDDGPIP GRTDKVLAIL DRFGVKGAFM MVGEMAEMHP ALARRVAEDG NTIGSHTYDH ADLTSLDFDA AMAEVVKGEL AVTKATGTDV SFFRFPYLAE SHRLCAAIAM RDLVVMDVDI DSKDYFAITP ASVTQRTMDL LHKRGRGIIL MHDIHKRTAT MLPTLLSELE SEGYKVVTLK LKKTQAPSNL VASADLVTTR
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