Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1041 |
Symbol | |
ID | 6979760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1059459 |
End bp | 1060199 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643395753 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002280561 |
Protein GI | 209548644 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0420142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA ATCTTGAAGG CAAGATCGCG CTGGTAACAG GCGCATCGCG CGGCATCGGC TATTTCACGG CGCTGGAGCT TGCGAAAGCC GGCGCCCATG TGATCGCTTG CGCCCGCACG GTCGGCGGGC TCGAAGATCT CGACGACGCG ATCAAGGCGG TCGGCGGCAC GGCGACGCTG GTGCCCTTCG ACCTGGCCGA CATGAACGCG ATCGACGCGC TCGGGGGCTC GATCTTCGAA CGCTGGGGCA AACTCGATAT CCTCGTCGCC AATGCCGGCG TGCTCGGCGT CATCTCGCCG ATCGGCCATA TCGAGGCGAA GGTGTTCGAG AAGGTGATGA CCATCAACGT CACCGCGACA TGGCGGCTGA TCCGCTCGGT CGACCCGCTG CTCGCCCGCT CGGATGCCGG CCGCGCCGTC ATCCTCTCAT CGGGTGCCGC CCATAAATGC CGCCCCTTCT GGAGCGCCTA TTCAGCCTCC AAGGCCGCCG TCGAGGCGCT GGCCCGGACC TGGGCCGGCG AAAGCCAATC GACGCCGTTG CGCATCACCA GCGTCGATCC CGGTGCGACC CGCACGGCGA TGCGCGCCCA GGCGGTGCCC GGCGAAGATC CGCAGACGCT GCCGCATCCT TCCGAGGTCG CCAAGGCGAT CCTGCCGCTG CTCGGCCCCG GCGTGACCGA GACGGGCAAA CTGTTCATCG TGCGGGACAA TAAGCTCGCC GATTACCGGC TGCCGGAATA A
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Protein sequence | MNINLEGKIA LVTGASRGIG YFTALELAKA GAHVIACART VGGLEDLDDA IKAVGGTATL VPFDLADMNA IDALGGSIFE RWGKLDILVA NAGVLGVISP IGHIEAKVFE KVMTINVTAT WRLIRSVDPL LARSDAGRAV ILSSGAAHKC RPFWSAYSAS KAAVEALART WAGESQSTPL RITSVDPGAT RTAMRAQAVP GEDPQTLPHP SEVAKAILPL LGPGVTETGK LFIVRDNKLA DYRLPE
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