Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1022 |
Symbol | |
ID | 6979741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1040155 |
End bp | 1040853 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643395734 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_002280542 |
Protein GI | 209548625 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0316911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.243181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTGT TCAACACGGT TCGCAAAACG ATCGTCCCCG TGCATAAGGA GGGTTATCCC TTCGTTGCCG CCTTCTTCGT CGCGTCGCTG ATCCTGGGCT GGATCTTCAA GCCGCTCTTC TGGATCGGCA TGATCTTCAC GCTGTGGTGC GCCTATTTCT TCCGTGATCC CGAGCGCGTC ACCCCGCAGG ACGACGATCT GGTGATCTCT CCGGCCGACG GCAAGGTCTC GGCGATCCAG ATGGTGACCC CGCCGGCCGA GCTCGACCTC GGCTCCGAGC CGATGCTGCG CATCTCGGTG TTCATGAACG TCTTCAACTG CCATGTGAAC CGGGCGCCGA TGCGCGGGCG CATCGTCAGC ATCAATTACC GCTCCGGCAG CTTCGTCAAT GCCGAACTCG ACAAGGCCAG CGAGGACAAT GAGCGCAACG GGCTGGTGAT CGAAACCCGC CACGGCCAGA TCGGCGTCGT CCAGATCGCC GGCCTCGTGG CGCGGCGCAT CCTCTGCTGG GCAAACCCCA ACGAACCGGT GGATGCCGGC GAGCGCTTCG GGCTGATCCG TTTCGGCTCG CGGCTCGACG TGTTCCTGCC CGCCGGTGCC GCGCCACGCG TCTCGCTCGG CCAGGTGGCG ATTGCCGGGG AAACTGTGAT TGCCGAATTC GCCTCCACCA AGGGTCCCAT CATCAGCCGC CGCAGCTAA
|
Protein sequence | MSLFNTVRKT IVPVHKEGYP FVAAFFVASL ILGWIFKPLF WIGMIFTLWC AYFFRDPERV TPQDDDLVIS PADGKVSAIQ MVTPPAELDL GSEPMLRISV FMNVFNCHVN RAPMRGRIVS INYRSGSFVN AELDKASEDN ERNGLVIETR HGQIGVVQIA GLVARRILCW ANPNEPVDAG ERFGLIRFGS RLDVFLPAGA APRVSLGQVA IAGETVIAEF ASTKGPIISR RS
|
| |