Gene Rleg2_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1022 
Symbol 
ID6979741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1040155 
End bp1040853 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID643395734 
Productphosphatidylserine decarboxylase 
Protein accessionYP_002280542 
Protein GI209548625 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0316911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.243181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGT TCAACACGGT TCGCAAAACG ATCGTCCCCG TGCATAAGGA GGGTTATCCC 
TTCGTTGCCG CCTTCTTCGT CGCGTCGCTG ATCCTGGGCT GGATCTTCAA GCCGCTCTTC
TGGATCGGCA TGATCTTCAC GCTGTGGTGC GCCTATTTCT TCCGTGATCC CGAGCGCGTC
ACCCCGCAGG ACGACGATCT GGTGATCTCT CCGGCCGACG GCAAGGTCTC GGCGATCCAG
ATGGTGACCC CGCCGGCCGA GCTCGACCTC GGCTCCGAGC CGATGCTGCG CATCTCGGTG
TTCATGAACG TCTTCAACTG CCATGTGAAC CGGGCGCCGA TGCGCGGGCG CATCGTCAGC
ATCAATTACC GCTCCGGCAG CTTCGTCAAT GCCGAACTCG ACAAGGCCAG CGAGGACAAT
GAGCGCAACG GGCTGGTGAT CGAAACCCGC CACGGCCAGA TCGGCGTCGT CCAGATCGCC
GGCCTCGTGG CGCGGCGCAT CCTCTGCTGG GCAAACCCCA ACGAACCGGT GGATGCCGGC
GAGCGCTTCG GGCTGATCCG TTTCGGCTCG CGGCTCGACG TGTTCCTGCC CGCCGGTGCC
GCGCCACGCG TCTCGCTCGG CCAGGTGGCG ATTGCCGGGG AAACTGTGAT TGCCGAATTC
GCCTCCACCA AGGGTCCCAT CATCAGCCGC CGCAGCTAA
 
Protein sequence
MSLFNTVRKT IVPVHKEGYP FVAAFFVASL ILGWIFKPLF WIGMIFTLWC AYFFRDPERV 
TPQDDDLVIS PADGKVSAIQ MVTPPAELDL GSEPMLRISV FMNVFNCHVN RAPMRGRIVS
INYRSGSFVN AELDKASEDN ERNGLVIETR HGQIGVVQIA GLVARRILCW ANPNEPVDAG
ERFGLIRFGS RLDVFLPAGA APRVSLGQVA IAGETVIAEF ASTKGPIISR RS