| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1007 |
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| Symbol | |
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| ID | 6979726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 1028867 |
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| End bp | 1030765 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643395719 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002280527 |
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| Protein GI | 209548610 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0707331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.304635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTG AAGCGCTCTT CTGGCAGCAA TGCAGCCAGG CCGTCACCGC CGATGGATCG
GTCGATGCGC AGCGCCTGAT GGAACTTGTC ATCGCGACCT ATCGTGTCCA TGAAAGCGAC
TATGACGAGA TCGAAAGAAG CGCGGAAACG CTGCTGAGGG AGAACCATGC GCTGAGAGGC
AATATGTCAG CCCTCAGCCA GGCATTCGAC GGACAGCAGA GACTCTTCGA AATCATCCTC
AACAACCTGC CACTCGGTCT TAGCGTCTTT GACGCAGATC AGCGGCTGAC GCTTTCAAAC
ATTCGCTTCG GTCAGCTCTT CGGCCTGACC CAGGCCGATG TCACTCCCGG CGCGACCATC
GCCGATCTCA TCGACAAAAT GCGCGGTGCA GAAGGCACTG GCTCCAAGCC GGGCCGGCGC
GCCGGGCGAC ATTCCTCCGC AGCCGTAAAA AGCAGCGGCA TCCGTCGGCG CGAATGGCTG
ATGGATGATG GCCGCATCAT CCAGAGCATG GTGACCATCC TTGCCGACGG CAGCAATATC
GCCATTCATG CCGATATTAC CGAGGATCGA AAGGCCGCCG AGCGCATCGC CTATCTCGCC
CACCACGACC CGCTGACCGG TCTTCCGAAC CGCATCCATT TCCGCGAGCA GGTCGATTCA
GCACTCGCAG AGCGCAAACG GGACGAGCAG ATCGCCCTCA TTCACCTCAA CCTCGACCGG
TTCAAATCGA TCAACAACAT GATGGGCGTG TCCGCCGGCG ACACGATCCT GCAGCAGGTC
GCCGCGCGCA TCCGGGCCTC GGCCGGTTCG GAGAACACCC TGGCGCGGCT GGGTTCGGAC
GAATTCGCCA TCCTGCAGAC GGGCAGACAG CAGCCGTGGA ACGTGACGGC GCTGGCCGAG
CAGATCCGCC GTGAGCTTTC CGAGCCATTC CTGCACGGCG AAAAACATAT GGAGCTCAGC
GTCTCGATGG GGATCGCAGT CGCCCCGGGG GATGGCGAGG AAACCGATAT CCTGCTGAAG
AATGCCGGCG TGGCGCTGTC GCATGCCAAG GCGGACGGGC GTAAGCGCGA GCGTTTCTTC
GCCGGCGAGA TGGAAGCGCA GATGCAGCTG CGCCACGCGC TGGAGGCGGA CCTCAGAGCA
GCCATCGAGA AGGAAGAATT CGAGCTGCAT TACCAGCCGC TCTATGACCT TTCGCAGCGG
CGCATCTGCG GCTTCGAGGC CCTAATCCGC TGGAACCATC CGATCCGCGG CCGTGTTGCG
CCGATAGATT TCATTCCGCT CGCCGAAGAG GTCGGCCTCA TCGTCGATAT CGGCCGCTGG
GTTTTGCACC AAGCCTGCAA CGATGCAGTA GAATGGCCTG AAGACATCAA GGTCGCGGTC
AACGTTTCGG CGATGCAGTT CAGCAGCAGC GACCTGACCA GTGATGTCGG CGAAGCGCTG
GCGGCGGCCT CATTGTCGCC GCTGCGGCTC GAGCTCGAAA TCACCGAAAG CGTGCTGATG
GAAAATCTCG GCGAGGTGCT GCCGATCCTG CATGCGCTGA AGGAGCGCGG CATCCGCATT
TCGATGGACG ATTTCGGCAC CGGCTACTCC TCGCTGAGCT ATCTCTCGAG CTTCCCCTTC
GACAAGATCA AGATCGACAA ATCCTTCGTC AACGACATCG TCGACAACAA GGAAGCGCAT
GCGATCATGC ACGCGATCAT TCTGCTCGGC GATGCGCTCG GCATGCGCGT CACCGTCGAA
GGCGTCGAGA CGGCCGAGCA GCTGGCGCTG CTGGAATGCG AGGAGTGCGA CGAGATCCAG
GGCTATCACA TCAGCCGGCC GAGACCGGCC TGCGACGTGC CCCATCTTCT CTCCCTGCCG
CCGAAGAATG GTGGGGTAAT GCATCTTCCG AGGTGCTGA
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| Protein sequence | MKAEALFWQQ CSQAVTADGS VDAQRLMELV IATYRVHESD YDEIERSAET LLRENHALRG
NMSALSQAFD GQQRLFEIIL NNLPLGLSVF DADQRLTLSN IRFGQLFGLT QADVTPGATI
ADLIDKMRGA EGTGSKPGRR AGRHSSAAVK SSGIRRREWL MDDGRIIQSM VTILADGSNI
AIHADITEDR KAAERIAYLA HHDPLTGLPN RIHFREQVDS ALAERKRDEQ IALIHLNLDR
FKSINNMMGV SAGDTILQQV AARIRASAGS ENTLARLGSD EFAILQTGRQ QPWNVTALAE
QIRRELSEPF LHGEKHMELS VSMGIAVAPG DGEETDILLK NAGVALSHAK ADGRKRERFF
AGEMEAQMQL RHALEADLRA AIEKEEFELH YQPLYDLSQR RICGFEALIR WNHPIRGRVA
PIDFIPLAEE VGLIVDIGRW VLHQACNDAV EWPEDIKVAV NVSAMQFSSS DLTSDVGEAL
AAASLSPLRL ELEITESVLM ENLGEVLPIL HALKERGIRI SMDDFGTGYS SLSYLSSFPF
DKIKIDKSFV NDIVDNKEAH AIMHAIILLG DALGMRVTVE GVETAEQLAL LECEECDEIQ
GYHISRPRPA CDVPHLLSLP PKNGGVMHLP RC
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