Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0993 |
Symbol | |
ID | 6979712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1015988 |
End bp | 1018222 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643395705 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_002280513 |
Protein GI | 209548596 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGC AGTACGAGCT CGTGGAGCGG GTTCAGCAAT ACAAGCCCGA TGCCAATGAA GCACTGCTGA ACAAAGCCTA TGTCTACGCC ATGCAGAAAC ATGGCCAGCA GAAGCGCGCG AGCGGCGATC CCTATATCTC CCATCCGCTC GAAGTCGCAG CCATCCTCAC GGACATGCAT CTCGATGAAT CGACGATCGC GGTCGCGCTG CTGCACGATA CGATCGAGGA TACGACGGCA ACGCGCGCCG AGATCGACGA ACTCTTCGGC GAGGATATCG GCCGCCTGGT CGAGGGCCTG ACCAAGATCA AGAAGCTCGA TCTCGTCACC AAGAAGGCCA AGCAGGCGGA AAATCTGCGC AAGCTGCTGC TCGCCATTTC CGACGATGTG CGCGTGCTGC TGGTCAAGCT TGCCGATCGC CTGCACAATA TGCGCACCCT CGATCATATG TCGGCCGACA AGCGTGCCCG CATCTCCGAG GAGACGATGG AAATCTATGC GCCGCTCGCC GGCCGCATGG GCATGCAGGA CATGCGCGAA GAGCTGGAAG AGCTTTCCTT CCGCCATATG AACCCGGAAG CCTACGAGAC CGTCACCAAA AGGCTGGAAG AGCTTTCCAA GCGCAATGAA GGCATCGTCA AGAAGATCGA GGCGGAACTG CGCGACTTGC TGGTCGCAAG CGGCCTGACG AGCGCCTATG TCAAGGGCCG GCAGAAGAAG CCCTATTCGG TCTTCCGCAA GATGCAGTCG AAGTCGCTTT CCTTCGAGCA GCTTTCCGAT GTCTACGGTT TTCGGCTCAT CGTCGAAGAT ATCCCGTCCT GCTACCGGGC GCTCGGCATT GTCCACACCC GCTGGCGCGT CGTGCCCGGC CGCTTCAAGG ATTATATCTC GACGCCGAAG CAGAACGATT ACCGTTCCCT GCACACCACC ATCGTCGGTC CATCCAGCCA GCGCATCGAA CTGCAGATCC GCACCAAGCG CATGCACGAA ATCGCCGAAT TCGGCATCGC CGCCCACACG CTCTATAAGG ACGGCGCCAC CAATGCCGAC GGCGACATTC TCTCCCGTGA ATCCAACGCT TATTCCTGGC TGCGCCATAC GATCGAGGCG CTGGCCGAGG GCGACAGCCC GGAAGAATTC CTCGAGCACA CCAAGCTCGA ACTCTTCCAG GACCAGGTCT TCTGCTTCAC GCCGAAAGGC AAGCTGATTG CTCTGCCGCG TGGCGCCACG CCGATCGATT TCGCCTATGC GGTGCACACC AATATCGGCG ATACCACGGT GGGCGCCAAG ATCAACGGCC GCATCATGCC GCTGGTGACG CGGCTTGCCA ACGGCGACGA GGTCGAGATC ATCCGCTCCG GCGTGCAGGT TCCGCCGGCC GCCTGGGAGG AGATCGTCGT CACCGGCAAG GCGCGCGCCG CCATCCGCCG CGCCACCCGC ATGGCGATCC GCAAGCAATA TGCCGGCCTC GGCCACCGCA TTCTCGAGCG CACCTTCGAC AGGGCCGGCA AGATCTTTTC ACGCGAGGCG ATGAAGCCGG CGCTGCATCG TCTCGGCCAG AAGGATGTCG AGGATGCGAT CGCCGCCGTC GGCCGCGGCG AGATGTCCTC GCTCGATGTG CTGCGCGCCG TCTATCCCGA CCATCAGGAT GAGCGCGTCA CGGTGAAACC CTCGGGCGAC GACGGCTGGT TCAACGTCCG CAGCGCGGCC GGCATGATCT TCAAGATCCC CGGCAAAACC AAGCCCGGGC TCGACGGCGG CCATTCGGAC ATCGACACCG ACGCCGATAT CGGGCCGATC CGCGGCCTGT CCGGCAATGT CGACGTCAAG TTCGCGTCGA CAGGCGCGGT GCCCGGCGAT CGCATCGTCG GCATCATGGA CCAGAGCAAG GGCATCACCA TCTATCCGAT CCAGTCGCCG AGCCTGCAGC GCTTCGACGA TCAGCCCGAC CGTTGGATCG ACGTCCGCTG GGATCTCGAC GAAGCCAACA AGTCGCGTTT CATGGCGCGC ATCATGGTCA ACGGGTTGAA TGAGCCCGGC ACACTGGCCA AGGTCGCCCA GACGGTTGCC GGCCTCGACG TCAATATCCG TCTGCTGAAT ACGGTGCGGG TCGCGGCGGA TTTCACCGAA ATGATGCTCG AGGTCGAGGT CTGGGACCTG CGTCAACTCA ATCAGCTGCT CGCCCAGATG AAGGAACTGG ATTGCATCGC CACGGTCCGG CGGCTCTATG AGTAA
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Protein sequence | MMRQYELVER VQQYKPDANE ALLNKAYVYA MQKHGQQKRA SGDPYISHPL EVAAILTDMH LDESTIAVAL LHDTIEDTTA TRAEIDELFG EDIGRLVEGL TKIKKLDLVT KKAKQAENLR KLLLAISDDV RVLLVKLADR LHNMRTLDHM SADKRARISE ETMEIYAPLA GRMGMQDMRE ELEELSFRHM NPEAYETVTK RLEELSKRNE GIVKKIEAEL RDLLVASGLT SAYVKGRQKK PYSVFRKMQS KSLSFEQLSD VYGFRLIVED IPSCYRALGI VHTRWRVVPG RFKDYISTPK QNDYRSLHTT IVGPSSQRIE LQIRTKRMHE IAEFGIAAHT LYKDGATNAD GDILSRESNA YSWLRHTIEA LAEGDSPEEF LEHTKLELFQ DQVFCFTPKG KLIALPRGAT PIDFAYAVHT NIGDTTVGAK INGRIMPLVT RLANGDEVEI IRSGVQVPPA AWEEIVVTGK ARAAIRRATR MAIRKQYAGL GHRILERTFD RAGKIFSREA MKPALHRLGQ KDVEDAIAAV GRGEMSSLDV LRAVYPDHQD ERVTVKPSGD DGWFNVRSAA GMIFKIPGKT KPGLDGGHSD IDTDADIGPI RGLSGNVDVK FASTGAVPGD RIVGIMDQSK GITIYPIQSP SLQRFDDQPD RWIDVRWDLD EANKSRFMAR IMVNGLNEPG TLAKVAQTVA GLDVNIRLLN TVRVAADFTE MMLEVEVWDL RQLNQLLAQM KELDCIATVR RLYE
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