Gene Rleg2_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0993 
Symbol 
ID6979712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1015988 
End bp1018222 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content62% 
IMG OID643395705 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_002280513 
Protein GI209548596 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC AGTACGAGCT CGTGGAGCGG GTTCAGCAAT ACAAGCCCGA TGCCAATGAA 
GCACTGCTGA ACAAAGCCTA TGTCTACGCC ATGCAGAAAC ATGGCCAGCA GAAGCGCGCG
AGCGGCGATC CCTATATCTC CCATCCGCTC GAAGTCGCAG CCATCCTCAC GGACATGCAT
CTCGATGAAT CGACGATCGC GGTCGCGCTG CTGCACGATA CGATCGAGGA TACGACGGCA
ACGCGCGCCG AGATCGACGA ACTCTTCGGC GAGGATATCG GCCGCCTGGT CGAGGGCCTG
ACCAAGATCA AGAAGCTCGA TCTCGTCACC AAGAAGGCCA AGCAGGCGGA AAATCTGCGC
AAGCTGCTGC TCGCCATTTC CGACGATGTG CGCGTGCTGC TGGTCAAGCT TGCCGATCGC
CTGCACAATA TGCGCACCCT CGATCATATG TCGGCCGACA AGCGTGCCCG CATCTCCGAG
GAGACGATGG AAATCTATGC GCCGCTCGCC GGCCGCATGG GCATGCAGGA CATGCGCGAA
GAGCTGGAAG AGCTTTCCTT CCGCCATATG AACCCGGAAG CCTACGAGAC CGTCACCAAA
AGGCTGGAAG AGCTTTCCAA GCGCAATGAA GGCATCGTCA AGAAGATCGA GGCGGAACTG
CGCGACTTGC TGGTCGCAAG CGGCCTGACG AGCGCCTATG TCAAGGGCCG GCAGAAGAAG
CCCTATTCGG TCTTCCGCAA GATGCAGTCG AAGTCGCTTT CCTTCGAGCA GCTTTCCGAT
GTCTACGGTT TTCGGCTCAT CGTCGAAGAT ATCCCGTCCT GCTACCGGGC GCTCGGCATT
GTCCACACCC GCTGGCGCGT CGTGCCCGGC CGCTTCAAGG ATTATATCTC GACGCCGAAG
CAGAACGATT ACCGTTCCCT GCACACCACC ATCGTCGGTC CATCCAGCCA GCGCATCGAA
CTGCAGATCC GCACCAAGCG CATGCACGAA ATCGCCGAAT TCGGCATCGC CGCCCACACG
CTCTATAAGG ACGGCGCCAC CAATGCCGAC GGCGACATTC TCTCCCGTGA ATCCAACGCT
TATTCCTGGC TGCGCCATAC GATCGAGGCG CTGGCCGAGG GCGACAGCCC GGAAGAATTC
CTCGAGCACA CCAAGCTCGA ACTCTTCCAG GACCAGGTCT TCTGCTTCAC GCCGAAAGGC
AAGCTGATTG CTCTGCCGCG TGGCGCCACG CCGATCGATT TCGCCTATGC GGTGCACACC
AATATCGGCG ATACCACGGT GGGCGCCAAG ATCAACGGCC GCATCATGCC GCTGGTGACG
CGGCTTGCCA ACGGCGACGA GGTCGAGATC ATCCGCTCCG GCGTGCAGGT TCCGCCGGCC
GCCTGGGAGG AGATCGTCGT CACCGGCAAG GCGCGCGCCG CCATCCGCCG CGCCACCCGC
ATGGCGATCC GCAAGCAATA TGCCGGCCTC GGCCACCGCA TTCTCGAGCG CACCTTCGAC
AGGGCCGGCA AGATCTTTTC ACGCGAGGCG ATGAAGCCGG CGCTGCATCG TCTCGGCCAG
AAGGATGTCG AGGATGCGAT CGCCGCCGTC GGCCGCGGCG AGATGTCCTC GCTCGATGTG
CTGCGCGCCG TCTATCCCGA CCATCAGGAT GAGCGCGTCA CGGTGAAACC CTCGGGCGAC
GACGGCTGGT TCAACGTCCG CAGCGCGGCC GGCATGATCT TCAAGATCCC CGGCAAAACC
AAGCCCGGGC TCGACGGCGG CCATTCGGAC ATCGACACCG ACGCCGATAT CGGGCCGATC
CGCGGCCTGT CCGGCAATGT CGACGTCAAG TTCGCGTCGA CAGGCGCGGT GCCCGGCGAT
CGCATCGTCG GCATCATGGA CCAGAGCAAG GGCATCACCA TCTATCCGAT CCAGTCGCCG
AGCCTGCAGC GCTTCGACGA TCAGCCCGAC CGTTGGATCG ACGTCCGCTG GGATCTCGAC
GAAGCCAACA AGTCGCGTTT CATGGCGCGC ATCATGGTCA ACGGGTTGAA TGAGCCCGGC
ACACTGGCCA AGGTCGCCCA GACGGTTGCC GGCCTCGACG TCAATATCCG TCTGCTGAAT
ACGGTGCGGG TCGCGGCGGA TTTCACCGAA ATGATGCTCG AGGTCGAGGT CTGGGACCTG
CGTCAACTCA ATCAGCTGCT CGCCCAGATG AAGGAACTGG ATTGCATCGC CACGGTCCGG
CGGCTCTATG AGTAA
 
Protein sequence
MMRQYELVER VQQYKPDANE ALLNKAYVYA MQKHGQQKRA SGDPYISHPL EVAAILTDMH 
LDESTIAVAL LHDTIEDTTA TRAEIDELFG EDIGRLVEGL TKIKKLDLVT KKAKQAENLR
KLLLAISDDV RVLLVKLADR LHNMRTLDHM SADKRARISE ETMEIYAPLA GRMGMQDMRE
ELEELSFRHM NPEAYETVTK RLEELSKRNE GIVKKIEAEL RDLLVASGLT SAYVKGRQKK
PYSVFRKMQS KSLSFEQLSD VYGFRLIVED IPSCYRALGI VHTRWRVVPG RFKDYISTPK
QNDYRSLHTT IVGPSSQRIE LQIRTKRMHE IAEFGIAAHT LYKDGATNAD GDILSRESNA
YSWLRHTIEA LAEGDSPEEF LEHTKLELFQ DQVFCFTPKG KLIALPRGAT PIDFAYAVHT
NIGDTTVGAK INGRIMPLVT RLANGDEVEI IRSGVQVPPA AWEEIVVTGK ARAAIRRATR
MAIRKQYAGL GHRILERTFD RAGKIFSREA MKPALHRLGQ KDVEDAIAAV GRGEMSSLDV
LRAVYPDHQD ERVTVKPSGD DGWFNVRSAA GMIFKIPGKT KPGLDGGHSD IDTDADIGPI
RGLSGNVDVK FASTGAVPGD RIVGIMDQSK GITIYPIQSP SLQRFDDQPD RWIDVRWDLD
EANKSRFMAR IMVNGLNEPG TLAKVAQTVA GLDVNIRLLN TVRVAADFTE MMLEVEVWDL
RQLNQLLAQM KELDCIATVR RLYE