| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0796 |
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| Symbol | |
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| ID | 6979514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 814046 |
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| End bp | 816343 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643395507 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002280316 |
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| Protein GI | 209548399 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.341606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC CGAGTGCCAG GCGATGGGAA TCGACCGATG CCCTGTCGGC CGAAACGCGG
CGCATCGTCG CCGCGACGGA GGCGATGATG GCCTCGACCG CCCATCATCT CTCCGACGGC
ATCGAGAACC TGCGCCTGAA GACGATCGTC CACGAACTTC CGGATTTCCT CTACGTCAAG
GATCGTGACA GCCGCTTCGT CTTCGCCAAC ACCGTCACCG CCAGCAGCCT CGGCCTGGAG
AGCGCTGATC TGCTTACCGG CAAACGTGAT TTCGACCTGT TCGATTTCGA GACGGCTCTC
CACCATTTCG ATATCGAGCA GCAGATCATG GCGACGGGGC AAGCCTGCAT CGACATGGAG
GAAAGCTACG TCCTGCCCGG CGGCAAAAGG CCGATATGCC GGCTGACCTC GAAGATACCG
CTGCGCAACG ATCGCGGCGA GGTCATCGGC CTCATCGGCG TTTCCCGCGA TATCACCGAA
CGCAAGCGCC AGGAGGATCT CCATCGCGAG CAGGCGAACC TGCTCGAAAT GATCGCCCGC
AACGAGCCGC TGCCGATGAT CCTCGAGGCG CTGGTGCTGA TGATCGAAGC GCAGCTGACC
GGCATCGACG GGTCGGTGCT GCTGCTGAAC GGCGAGGGCA CCAGGCTCTA TCACGGCGCC
GCCCCCAATC TGCCCGGCGG CTACAGCCGG CTGATCGACG GCGTCACCAT CGGTCCCAAG
GTGGGCTCGT GCGGCACCGC CGCTTGGCGT GGCCAGACGG TGATCGTCGA AGACGTGATG
AGCGATCCGC TGTGGGAGGA TTTCCGCGCG CTGGTCGCGC CCTTCGGCTT CCGCTCCTGC
TGGTCGACGC CGATCGTCAC CTCGCAGAAC AATGTGCTCG GCACCTTCGC CCTCTACTCC
AGGGAAGTCC GCCGGCCCAC GGAGCACGAA ATAAAGCTGG TGGCGCTCGC CACGCACATC
GCCGGCATCG CCATCGAGCG CAAGCGTGTC GACGACCGCA TCCATTTCAT GGCCCATCAC
GACGATCTCA CCGGTCTGCC GAACCGGGCC TTCCTGAAGG AGCGGCTCGC CAATATCCTC
GACCAGGCCC GGCGCCACAC CCGCAAGGTG ACTGTCGCCT ATATCGATCT CGATAATTTC
AAGGACATCA ACGACGGCCG CGGCCACGCC GCCGGTGACG AGGTGCTGAA GGAAACCGCG
GCCCGCATGG CCAACAGCAT CCGGGCCTCG GATATGGTGG TGCGTCTCGG CGGCGACGAA
TTCCTCGTCG TGCTCGTTCA TCAGTCGAGC CACGATGCCG GCATCACGCG CCGCCTCCGC
GAGTTGCAGA AGGCAATCAA CCGGCCGATC CCCAGCGAAG GCGGCGAGAT CACCGTCACC
TCGAGCATCG GCGTTGCCGC CTTTCCCTTC GACGGCGCGA CCTCGGAAGA GCTTCTCGCC
AATGCCGACC GCGCCATGTA CCGGGCCAAG GAGCTCGGCC GCAACACCCT GCAGCATCAC
GATGGCGGCG GCACGCCTGT GGGAATGCCG CTCGGCGAGC AGGAGGAGCT GCACCAGGCG
ATTACCGGCG ACCAGCTGTT CCTGCAATAT CAGCCGCAGG TCGATGTCGC CACCGGCCGC
ATCACCGGCA TCGAGGCGCT GGTGCGCTGG AACCATCCGG CCAAGGGCAG GGTGCCGCCG
GTCAATTTCA TTCCGCTCGC CGAAGAGACC GGCCTCATCG TTCCCCTCGG CCTCTGGGTG
CTGAACGAGG CGTGCCGCCA GGCGCGCCAA TGGCAGGATA TGGGCCTGAC GCCGCTGACC
ATCGCCGTCA ACGTCTCGGC CAAGCAGTTC GCCGATCCGG ATTTTGCAAG CCACGTCGCC
GAAGCGCTGG AGCGCCACCG CCTGCAAGCG CGCTGGCTGG AGCTCGAGGT TACCGAAAGC
GTGGTGATGC AGGATGCCGA ACGCGCGCTC GCCATGATGG AATCGCTGCG GGCGCTCGGT
GTTCGCCTGT CGATCGACGA TTTCGGCTCC GGCTATTCCA GCCTGGCGGC GCTGAAGACC
TTCCCCTTCG ACCGCCTGAA GATGGACCGT TCGCTGGTCG AGGCCCTGCC GGGCGACAAG
ACCGCCGTCG CCATCGCCTC GGCGGTCATT TCGCTGGCAC AGACGCTGAA GCTTTCGGTC
CTCGCCGAAG GTGTCGAAAC CGACGCCCAG ATGGATTTCC TGCGTCACGC GCATTGCGAA
GAAGCGCAGG GCTATCGCTT TTCGAAGCCC GTCTCTCCGG AGGAAATCCC CGGATTGCTG
CGGGCGCGCA GCCTCTAA
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| Protein sequence | MPKPSARRWE STDALSAETR RIVAATEAMM ASTAHHLSDG IENLRLKTIV HELPDFLYVK
DRDSRFVFAN TVTASSLGLE SADLLTGKRD FDLFDFETAL HHFDIEQQIM ATGQACIDME
ESYVLPGGKR PICRLTSKIP LRNDRGEVIG LIGVSRDITE RKRQEDLHRE QANLLEMIAR
NEPLPMILEA LVLMIEAQLT GIDGSVLLLN GEGTRLYHGA APNLPGGYSR LIDGVTIGPK
VGSCGTAAWR GQTVIVEDVM SDPLWEDFRA LVAPFGFRSC WSTPIVTSQN NVLGTFALYS
REVRRPTEHE IKLVALATHI AGIAIERKRV DDRIHFMAHH DDLTGLPNRA FLKERLANIL
DQARRHTRKV TVAYIDLDNF KDINDGRGHA AGDEVLKETA ARMANSIRAS DMVVRLGGDE
FLVVLVHQSS HDAGITRRLR ELQKAINRPI PSEGGEITVT SSIGVAAFPF DGATSEELLA
NADRAMYRAK ELGRNTLQHH DGGGTPVGMP LGEQEELHQA ITGDQLFLQY QPQVDVATGR
ITGIEALVRW NHPAKGRVPP VNFIPLAEET GLIVPLGLWV LNEACRQARQ WQDMGLTPLT
IAVNVSAKQF ADPDFASHVA EALERHRLQA RWLELEVTES VVMQDAERAL AMMESLRALG
VRLSIDDFGS GYSSLAALKT FPFDRLKMDR SLVEALPGDK TAVAIASAVI SLAQTLKLSV
LAEGVETDAQ MDFLRHAHCE EAQGYRFSKP VSPEEIPGLL RARSL
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