| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0682 |
|---|
| Symbol | |
|---|
| ID | 6979399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 711215 |
|---|
| End bp | 712408 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643395394 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002280204 |
|---|
| Protein GI | 209548287 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.260378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAT CCCTTATCGT CATCTTCACC GCCATTGTCC TCGATGCCGT CGGCATCGGG
TTGATTTTCC CGATCCTGCC GTCGCTGCTG CGCGATATCA CCCATGCCGA AAACGTCGCG
CCCTTTATCG GCACGATGAC CGCGCTCTAT GCGGTGATGC AGTTCATCTT CGCGCCCGTG
CTCGGGGCGC TGAGCGATCG GCTTGGCCGC CGCCCCGTGC TGCTGATTTC GCTTGCCGGC
GCCGCCGTCA ACTACTTGTT TCTCGCCTTT GCGCCCAATC TCGCGCTGCT GTTCGTCGGC
CGGGCGATTG CCGGGCTGAC CAGCGCCAAT ATCTCGGTGG CGACAGCCTA TATCACCGAT
ATTTCACCCG AGGAGAAACG CGCCCGCCGC TTCGGACTGT TCAACGCGAT GTTCGGCCTC
GGCTTCATCA TCGGCCCGGT GCTCGGCGGT GTGCTCGGCG ATCATTGGCT GCGGCTGCCG
TTCATCGCGG CCGCCGTGCT CAATGGCGCC AACCTGCTGC TTGCCTTCTT CATCCTTCCG
GAATCGCGCC CGGGCAGCCG CGAGAAGATC GATCTGGCGG CGCTCAATCC CCTCCGACCG
CTGCGTTCGG TGCTGGAGGT CAAGAGCCTG CTGCCCGTCG TCATCCTGTT CTTCATCTTC
AGCGCCACCG GCGAGGCCTA CGGCACCTGC TGGGCGCTGT GGGGCAGCGA CGCCTTCCAC
TGGAACGGGC TGTCGATCGG CCTTTCCCTC GGCGCCTTCG GCATCTGCCA GACGCTGGCC
CAGGCCTTGC TGCCGGGACC GGCCGTCAGG CTGCTCGGCG AACGCGCGGC GATCCTCACC
GGTGTCATCG GCGTCTGCAT CGCACTGACC GTCATGGCCT TTGCCGGGAG CGGCTGGGTG
ATCCTCGCGA TCATGCCAGT CTTCGCGCTC GGCGGCATCG GCGTTCCGGC GCTGCAATCG
CTGGCGACCC GACAGGTCGA TGAAGATAGC CAGGGCCAGT TCCAGGGCGT GCTGGCCTCC
GCCGTCAGCC TCGCCTCGAT CGTCGCGCCG CTTGGCTTTT CCAGCGTCTA TTTCCTTGTG
AGGGAGACGT GGCCGGGCGC CATCTGGCTA TCGGTGGTCG TCGTTTACGG GCTCGCGGTG
CCGCTGGTTC TCGGCTTGCG GCTGAAGACG GCGGAGCGGG CGCCTGTGAG TTAG
|
|---|
| Protein sequence | MTRSLIVIFT AIVLDAVGIG LIFPILPSLL RDITHAENVA PFIGTMTALY AVMQFIFAPV
LGALSDRLGR RPVLLISLAG AAVNYLFLAF APNLALLFVG RAIAGLTSAN ISVATAYITD
ISPEEKRARR FGLFNAMFGL GFIIGPVLGG VLGDHWLRLP FIAAAVLNGA NLLLAFFILP
ESRPGSREKI DLAALNPLRP LRSVLEVKSL LPVVILFFIF SATGEAYGTC WALWGSDAFH
WNGLSIGLSL GAFGICQTLA QALLPGPAVR LLGERAAILT GVIGVCIALT VMAFAGSGWV
ILAIMPVFAL GGIGVPALQS LATRQVDEDS QGQFQGVLAS AVSLASIVAP LGFSSVYFLV
RETWPGAIWL SVVVVYGLAV PLVLGLRLKT AERAPVS
|
|---|
| |