| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0632 |
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| Symbol | |
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| ID | 6979348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 655258 |
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| End bp | 658155 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643395344 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002280155 |
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| Protein GI | 209548238 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0919464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCA AGTCACCGTC CGGACGAGTG ATCGCGGTGA TCGCAGCCCT TTTCCTGGCG
GCCTTCGCCC TGGTGGCGGG CGCTGCCCAG GCGGCCGAAC CGGTGAAGAT TTCCCGTGAC
GATACCGCGC TCGACCTGAC GGCAACGACC GAAATCTACG TCAATCAGGG CGAGGCCTTT
CAGGTGTCGA CGGCCGCTGG CGCCGACGGT ATCCGCCGCC GCATCGAGGT CAGAGCAAGC
TCGGAAAACC ACCAGGGCGA CTGGGCGGTG TTTGCGCTCG CCAATGTGTC GGAGGAACAG
CTCGAGCGCG TCATCGTCGC GCCGCACTTC CGCCTGGTCA ATTCCAAGCT GTTCTGGCCG
GATCTCGGCT CGCAGCGCAT CAGCGCCATC ACGCCGAGCG AAGGCTTTGC GCTCGATCGG
CAGCCGAGCG ACGAGGCCGA CGTCTTCCGC ATCACGTTGA ACCCAGGCGC TGTCATCACC
TTCGTCGCCG AGCTGTCGAC GCCGGAGCTG CCGCAGATCT ATCTCTGGGA ACCGAACGCC
TACAAGGATA CGATCAACGC CTTCACGCTC TATCGCGGCA TCGTGCTCGG CATTGCCGGC
CTGCTGGCGG TATTTCTGAC CATCCTCTTC GTCGTCAAGG GCACCTCGAT GCTGCCGGCA
ACGGCGGCAC TTGCCTGGGC GGTGCTCGGC TATATCTGCG TCGATTTCGG TTTTCTCGGC
AAGCTGATCA GCGTCGCCTC GGCCGACCAG CGAATATGGC GCGCCTGCGC TGAGGTGGCG
CTCGCCTCGA GTTTCGTCAT CTTCCTCTTT ACCTATCTCA ATCTCAACCG CTGGCATGCG
CATCTCGGTT ACGCCACCCT TGCCTGGGTG CTCGGCCTTG CCCTGCTCTT CGGCGTGGCG
ATCTACGATC CGTCGATTGC CGCCGGCATC GCCAGGCTCT CCTTCGCGCT GACGGCGGCG
ACCGGGCTCT TGCTGATCGT CTATCTCGGC TTCAACCGCT ACGACCGCGC CATCCTGTTG
GTGCCGGCCT GGGCGCTGAC GCTCGTCTGG CTGTTCGGCG CATGGATGAC CGTCACCGGA
CGGCTCGACA ACGACATCAT CCAGCCGGCG CTCGGCGGCG GGTTGGTGCT GATCGTACTG
TTGATCGGCT TCACCGTCAT GCAGCACGCC TTTGCCGGCG GCGCCTTCCA GCAGGGGCTG
TTTTCCGATC TCGAGCGGCA ATCGCTGGCG CTGACCGGCT CCGGCGACAT GGTGTGGGAT
TGGGACGTGG CGCGCGACCG CGTCGTCACC ATTCCCGACG TCTCGGCCAA GCTCGGTCTA
TCGCCGGGCA CCATGCATGG GGCGGCGCGC AACTGGCTGC CGCGGCTGCA CCCGGATGAT
CGCGACCGCT TCCGCGCCAC GCTCGACGTG CTGCTCGAAC ACCGGCGCGG CCGGCTGAAC
CACGAGTTCC GCATTCGCGC CGAGGACGGG CATTTCCACT GGCTGCTGAT CCGCGCCCGG
CCGGTGCTCG GCTCGAACGG CGAAATCATC CGCTGCGTCG GCACGATCGT CGACGTGACC
GAGCAGAAGA ATTCCATCGA GCGGCTGCTG CACGATGCGC TGCACGACAA TCTCACCGGA
CTGCCGAACC GGCAGGTGTT CCTCGACCGG CTGCAGGCGG TGCTGGCGCT GGCGCCGGGC
GGCGACACGC TCAAGCCGAC CGTGATGGTG ATCGACATCG ACCGCTACAA GCTGGTCAAT
GATGCGCTCG GGGTTGCGGC CGGCGACAAT ATCCTCATCG CGCTGACCCG GCGCCTGCGC
CGGCTGTTGA AGCCGCAGGA CACGCTGGCG CGGCTGGCCG GCGACCAGTT CGGCCTCATC
CTGGTGTCCG AGCACAATCC GGCCAAGGTC GCCGATTTCG CCGATGCGAT CAGCAAGGCG
ATCATGGTGC CGATCAACTT CGCCAACCGC GAGATCATCC TGACGGCTTC GATCGGGCTG
ACCTCCTGGG TGGACCGGCA GGAGAGCGCC ACCGGCCTGC TCAGCGACGC CGAGCTTGCC
ATGTACCGGG CAAAACGGGC CGGCGGCAAC CGCGTCGAGC CGTTCCAGCC GGCCTTCCGC
GATTTCGGCA CCGACCGGCT GCAGCTCGAA ACCGATCTGC GCCGCGCCAT CGAGCGCAAG
GAATTGTCGA TGGTCTACCA GCCGATCGCC CGGCTTGAAG ATGTCGAGGT CGCCGGCTTC
GAGGCGCTGA TGCGCTGGGA ACATCCCAAG CGCGGCAATA TCCCGCCCTC CGAATTCATC
CCGATCGCCG AGTCCTCCGA TCTCATCGGC CCGCTCGGCA TGTTCGCGCT GGAACAGGCA
ACCAACGATC TGATGAGCTG GCAGAACCAG ACCGGCGAAC TGCCGATCTT CGTGTCGATC
AATCTGTCGA GCGTGCAGCT GCTCAACAAC GAGCTCTATG ACGATGTGCG TTCGGTTCTT
GCCAAGACCC ATTGCCAGCC CTCGCGCCTG AAGCTCGAAC TGACCGAGTC CATGGTGATG
GAAAACCCGG AACAGGCCCG GCTCGTGCTG CAGAAGCTGA AGGAAGCCGG CATCGGCCTG
GCGCTCGACG ATTTCGGCAC CGGCTATTCG TCGCTTGCCT ATCTCACCCG CTTCCCCTTC
GACATGATCA AACTCGACAA GGCCCTGGTG CGCGACGGCA GCGACAAGAA GGCGACTGTG
CTCAGATCGG TGATCGCAAT GGCGCGCGAA CTCGAAATGA AGGTGGTCGC CGAGGGGATC
GAATCCAACG AGGATGCGAT CGAACTCGCC AAGATGGGCT GCAGCTACGG ACAGAGCTAT
CTGTTCGGCC CGCCGATCGC TTCGGAATCG GTGCTGCGGC TGCTGCGGGA GCGGTTTCCG
CTGACAAAGC GGGCGTGA
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| Protein sequence | MLPKSPSGRV IAVIAALFLA AFALVAGAAQ AAEPVKISRD DTALDLTATT EIYVNQGEAF
QVSTAAGADG IRRRIEVRAS SENHQGDWAV FALANVSEEQ LERVIVAPHF RLVNSKLFWP
DLGSQRISAI TPSEGFALDR QPSDEADVFR ITLNPGAVIT FVAELSTPEL PQIYLWEPNA
YKDTINAFTL YRGIVLGIAG LLAVFLTILF VVKGTSMLPA TAALAWAVLG YICVDFGFLG
KLISVASADQ RIWRACAEVA LASSFVIFLF TYLNLNRWHA HLGYATLAWV LGLALLFGVA
IYDPSIAAGI ARLSFALTAA TGLLLIVYLG FNRYDRAILL VPAWALTLVW LFGAWMTVTG
RLDNDIIQPA LGGGLVLIVL LIGFTVMQHA FAGGAFQQGL FSDLERQSLA LTGSGDMVWD
WDVARDRVVT IPDVSAKLGL SPGTMHGAAR NWLPRLHPDD RDRFRATLDV LLEHRRGRLN
HEFRIRAEDG HFHWLLIRAR PVLGSNGEII RCVGTIVDVT EQKNSIERLL HDALHDNLTG
LPNRQVFLDR LQAVLALAPG GDTLKPTVMV IDIDRYKLVN DALGVAAGDN ILIALTRRLR
RLLKPQDTLA RLAGDQFGLI LVSEHNPAKV ADFADAISKA IMVPINFANR EIILTASIGL
TSWVDRQESA TGLLSDAELA MYRAKRAGGN RVEPFQPAFR DFGTDRLQLE TDLRRAIERK
ELSMVYQPIA RLEDVEVAGF EALMRWEHPK RGNIPPSEFI PIAESSDLIG PLGMFALEQA
TNDLMSWQNQ TGELPIFVSI NLSSVQLLNN ELYDDVRSVL AKTHCQPSRL KLELTESMVM
ENPEQARLVL QKLKEAGIGL ALDDFGTGYS SLAYLTRFPF DMIKLDKALV RDGSDKKATV
LRSVIAMARE LEMKVVAEGI ESNEDAIELA KMGCSYGQSY LFGPPIASES VLRLLRERFP
LTKRA
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