Gene Rleg2_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0561 
Symbol 
ID6979277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp582580 
End bp583326 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID643395273 
Producthemolysin A 
Protein accessionYP_002280084 
Protein GI209548167 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.613541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC AAAACAGCCA ACGCCTCGAC CAACTTCTCG TCTCCCGCGG CCTCTTCGCC 
AGCCGCTCGC GGGCCCGCGA CGCCGTGCAA CGCGGCACCG TCCGGATCGC CGGCCAGGTG
GTGACGAAAG CCGGCGCGCT CATCGGCGAC GATGCCGCCA TCGAGATCGA CGACCCGGCG
CAGGACTATG TCTCGCGCGC GGCGTTGAAG CTTGCTAGCG CCCTCGAGCA TTTCCGGCTC
GATCCCGCCG GCCATCACTG TCTTGATATC GGCGCTTCCA CCGGCGGCTT TACCGAGGTG
CTGCTGCAGC GCGGCGCTGC GCATGTCACA GCAATCGATG TCGGCCATGG GCAGATGCAT
CCGCGCATTG CAGCCGATCC ACGGGTGACG AACAAGGAAG GCCTCAACGC CCGCCACCTG
ACGGCCGAGG ATATCGGCGA GCCCGCCGAT TTCATCGTCT CCGACGTCTC CTTCATCTCG
CTGAAGCTGG CGTTGGCGCC GGCTCTCGAT ATTGCCGAAG CGGGTGCGGT CGCCGTACTC
CTGGTCAAGC CGCAGTTCGA GGCGGGGCGC GAGGCGATCG GCAAGGGCGG ACTGTTGAAG
GACCCCTCCT CCGCGCCCGC CGTCGCTGCG GAACTGGAGC GCTGGTTCAT CGAGGATATG
GGCTGGAAAA GCCTCGGCCT CATCCCCTCT CCGATTGCCG GCGGCGACGG CAATCAGGAA
TATCTTCTGG CAGGATCGAA ACCGTGA
 
Protein sequence
MSDQNSQRLD QLLVSRGLFA SRSRARDAVQ RGTVRIAGQV VTKAGALIGD DAAIEIDDPA 
QDYVSRAALK LASALEHFRL DPAGHHCLDI GASTGGFTEV LLQRGAAHVT AIDVGHGQMH
PRIAADPRVT NKEGLNARHL TAEDIGEPAD FIVSDVSFIS LKLALAPALD IAEAGAVAVL
LVKPQFEAGR EAIGKGGLLK DPSSAPAVAA ELERWFIEDM GWKSLGLIPS PIAGGDGNQE
YLLAGSKP