Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0407 |
Symbol | |
ID | 6979122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 418897 |
End bp | 420216 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643395120 |
Product | ABC transporter related |
Protein accession | YP_002279932 |
Protein GI | 209548015 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.565594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACA TCGTTATTCG AGCAGAGCAC GTCAGCAAGC TCTATCGTCT TGGCGTGATC AATCACGGCA CCCTCTATCG CGACCTTCAA AGCTGGTGGG CGAAGTGGCG CAATCTTCCG GATCCGAACG TCTCGGTATC CGACCATACG TCCGACCGCG GTGCGCAGTC GCGGCTGAAG GGAGACATCT TCCATGCGCT GGATGATGTC TCTTTCGAAG TCGGACAGGG CGAGATCGTG GGGATTATCG GCAGGAACGG GGCCGGAAAA TCCACGCTGT TGAAGGTGAT GTCACGGATC ACCATGCCCA ATTCCGGCTT CATCGGCATA CGAGGCAGAA TTGCCAGCCT GCTTGAGGTC GGCACCGGAT TTCATCCGGA ACTCACCGGC CGGGAGAACG TCTATCTCAA TGGCGCCATC CTCGGCATGA GCCGTGCCGA GGTCAGGTCG AAATTCGATG AAATCGTCGA GTTTGCGGAG ATCGGCGAAT TTATCGACAC GCCGGTGAAG CGGTATTCGT CCGGCATGTA TGTGCGTCTG GCCTTCGCCG TCGCGGCGCA TCTCGAGCCG GAAATACTGC TGGTCGACGA GGTATTGGCC GTCGGCGACG TCAACTTCCA GAACAAATGC ATGGGGCGCA TGCAGGAGGT CACGAAGGCC GGCCGAACGA TTATCTTCGT CAGCCACAAT ATGACGGCGA TCAGTAGCAT CTGCCCAAAA TCGATTCTGA TGGCCGATGG CAAGGTCGCT GCGATGGGCG ATACGGCAGA TGTGATAAAA GCCTATCTCG ATCGCCCGGA ATTCGGCGGC ACCGCAAGTT ACTCGGTCAA TCCCGAGGAC GTCGAAGGCA AGGCGGTTAT ATGCCGTGTC GCAGTGTTGA ATGAGAAGGA CGAGGCTTCG GGAACACTGG AACTGTCGAA GGGATTTTCC GTCGAGGTCG AGTACGAGCT GAGGGAGCCT CTTTCTGGTC TCTCGGTCGG GATGCAGATC ATGATGGAGG ACGGCTATAC CACCCTCGTC AGCCTTTCCG ATCCTGAGCT CGACGTCGGG CGCTTGGATA CCCGGCCAGC CGGTTATTAT CGCGCCCGGG TCAAATTTCC CGGATATCTT CTCAATACCG GCACCTTCTA CCTGCGACTG GGCATATCGA GCCGGTTCTC GATATATTCG GTCGCCGAGG GCATCCGGTT CGACGTGGAG GATAATGTCG GAATTATCCA GATGCTGGGT CAGCAACGGA AGCCATCGAT TTCGGCGATA CAGCTGCCTT GGGAGGTTGA GAAGCTCTTC CTGCGCGATT CTGAGGGTGT GTTGAAATGA
|
Protein sequence | MNDIVIRAEH VSKLYRLGVI NHGTLYRDLQ SWWAKWRNLP DPNVSVSDHT SDRGAQSRLK GDIFHALDDV SFEVGQGEIV GIIGRNGAGK STLLKVMSRI TMPNSGFIGI RGRIASLLEV GTGFHPELTG RENVYLNGAI LGMSRAEVRS KFDEIVEFAE IGEFIDTPVK RYSSGMYVRL AFAVAAHLEP EILLVDEVLA VGDVNFQNKC MGRMQEVTKA GRTIIFVSHN MTAISSICPK SILMADGKVA AMGDTADVIK AYLDRPEFGG TASYSVNPED VEGKAVICRV AVLNEKDEAS GTLELSKGFS VEVEYELREP LSGLSVGMQI MMEDGYTTLV SLSDPELDVG RLDTRPAGYY RARVKFPGYL LNTGTFYLRL GISSRFSIYS VAEGIRFDVE DNVGIIQMLG QQRKPSISAI QLPWEVEKLF LRDSEGVLK
|
| |