Gene Rleg2_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0400 
Symbol 
ID6979115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp413118 
End bp413723 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID643395113 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002279925 
Protein GI209548008 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.449962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.462601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCG CGCCTACCTC ATTTCCTGCC TATAGTCGCG CGAGAATGGA ATCGCCGGTT 
CGTCCGGCGG TTTCGAAAAA TGCAGGATCG GCGGAGGCGG CCATCGCCAG CGAAGCGGAT
ATCAGGAGCG GCCTGACGGA AAATCTGGCA AGGCTCTGGC GTTATGGTCT TGTTCTCTCG
CATCAGCGCG ATGTCGCCGA CGATCTGGTG CAGGCGACCT GCGTTCGCGC GCTGGAACGC
GCCGATCAGT TCATTCCCGG CACCCGGCTC GACCGCTGGC TGTTTTCGAT CCTCCATTCG
ATCTGGCTGA ACGAGATACG TTCCCGCCGG GTGCGCCAAG GCCAGGGTTT CGTCGATGCC
CGGGAGACGC TGACCTTCGA CGGCGCGCAT GCCACCGAAA CGCAGGTGAT GGCCGGTCAG
GTGCTGAAAC GGGTCAATGC GCTGCCCGAA GCACAGAGAA CGGTGGTGTT CCTCGCCTAT
GTCGAAGGGC TTTCCTATCG CGAGGTGGCA AGCATATTGG ATATTCCGAT CGGAACCGTG
ATGAGCCGGC TGGCGGCTGC CCGCGCCAGG CTCTCCGGCG ATGGCCTGGA AGGGGGACGG
CAATGA
 
Protein sequence
MSVAPTSFPA YSRARMESPV RPAVSKNAGS AEAAIASEAD IRSGLTENLA RLWRYGLVLS 
HQRDVADDLV QATCVRALER ADQFIPGTRL DRWLFSILHS IWLNEIRSRR VRQGQGFVDA
RETLTFDGAH ATETQVMAGQ VLKRVNALPE AQRTVVFLAY VEGLSYREVA SILDIPIGTV
MSRLAAARAR LSGDGLEGGR Q