| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0392 |
|---|
| Symbol | |
|---|
| ID | 6979107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 406025 |
|---|
| End bp | 406915 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643395105 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002279917 |
|---|
| Protein GI | 209548000 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.200467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG TCACCGTCAA AACCGGTCAG CCATCCGCTC TTGCGGAGTT CTGGCATTAT
TTCTCCCGCA ACAAGGGCGC CGTCATCGGC CTCGTCGTCT TCGTCATTAT CCTGGTCGTC
GCAGTCTTCG CGCCGGTCTT TGCGCCGCAT ACGCCGAACG AGCAGAACCG CCAGGTGCTC
TTGGCCGTGC CGGCCTGGAT GGAAGGCGGC AGCATCTCGT TCCCGCTCGG AACCGATGCC
GTCGGCCGCG ATATCCTTTC GCGACTGATC TACGGCGCGC GCTTCTCGCT CTTCATCGGC
GTCGTCGTCG TCACCCTTTC GGTCGTCTGC GGCGTTCTGA TCGGTCTCGT CGCCGGCTAT
TTTCGCGGCA AGGTCGATAC GGCGATCATG CGGCTGATGG ATATCATCCT GGCCTTCCCG
TCACTGCTGC TCGCCCTCGT GCTCGTGGCC GTGCTCGGCC CAGGCCTTAC CAATGCGATG
ATCGCGATTT CGCTGGTCAA CCAGCCGCAT TTCGTGCGGC TGACGCGCGC CTCCGTCATC
ACAGAGCGCG AGAAGGAATA TGTGATCGCC TCGCGTGTTG CCGGCGCCGG CACCTTCCGC
CTGATGTTCA AGACCATCCT GCCGAACTGT CTTGGGCCGC TGATCGTCCA GGCGACGCTC
GCCTTCTCCG CCGCGATCCT CGACGCCGCC GCCCTCGGCT TTCTCGGCAT GGGCGCTCAG
CCCCCGACAC CCGAATGGGG CACGATGCTC GCTGAATCCC GCGAGTTTAT CTCGCGCGCC
TGGTGGGTCG TAACATTCCC GGGCCTTGCC ATCCTCATCA CCGTTCTCGC CATCAATCTG
ATGGGTGACG GCCTGCGCGA TGCGCTTGAC CCCAAGCTGA AGAGGTCGTG A
|
|---|
| Protein sequence | MSTVTVKTGQ PSALAEFWHY FSRNKGAVIG LVVFVIILVV AVFAPVFAPH TPNEQNRQVL
LAVPAWMEGG SISFPLGTDA VGRDILSRLI YGARFSLFIG VVVVTLSVVC GVLIGLVAGY
FRGKVDTAIM RLMDIILAFP SLLLALVLVA VLGPGLTNAM IAISLVNQPH FVRLTRASVI
TEREKEYVIA SRVAGAGTFR LMFKTILPNC LGPLIVQATL AFSAAILDAA ALGFLGMGAQ
PPTPEWGTML AESREFISRA WWVVTFPGLA ILITVLAINL MGDGLRDALD PKLKRS
|
|---|
| |