Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0381 |
Symbol | |
ID | 6979095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 391728 |
End bp | 395618 |
Gene Length | 3891 bp |
Protein Length | 1296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643395093 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002279906 |
Protein GI | 209547989 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00957634 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCAG TCCAATATCC GTTCATCGAT ATCGCCGTGC ATGCACGGGT GCGGGAACGT TTTTCACGCG GCGAAGCGAT GGTGCTGTTT TCGGCCGACC TTGCCCGCCT ACTCTGGGCG AACGGTGCGG GTGCCGAACT TTTCGGCCAT GCAGCCGTCT ATGATCTGCT CGATCAGGGT GTCGACCGCA CCGATATTAC CTTCCGCCAG CTGGAAACGG CGGCGCGCCA GCTTGCCGAT ATCGGCGACC ACAGAAGCCT GATGATCCGC GTCGCCAAGG GCTTTCAGCG TGTGCAGGTG CAGGCGGCGG CCGAACTGAT CCGGCTCTCG ACAGGCGAAA AGGCCATGCT GTTTTCGGTG CCGGTCTCGG CAAAGCCGCT GACGTCAGGC GCTTCGGCGG CCCAGATGCT GCAGGGGCTC GATGACCCCG ACACCCATAT GGCCGTGATC GGCGCCGATG GCGACGTTAT CGCCGCCTCG CCGGGCTTTG CCTCGCTCGG GATTTCCGCG CAGACGGCAA AGACCTTGAT CAACCTTGCC GGCGCGCATC CCGACCGGCT GGTGAAGCGA CCCGTTGCCA CCGGCAGAGG CAATCTTCCG GCTGCCGTCG GCAAGCTCAG CGACGAGCCG GCGCTCAACC TGCTCTTTGC CGTGGAGACC GCGATCGGCC ATCTCGACCC GATCGACGCA GCCGCGTCAG ATCCGATCGA TACCCCCGCG CTCGACTTGA TTGATACGCC CGTGCAGGAA GAAAGCGTGC CGCCGGCCGA AGACTTCCGC GACGAGTCCG TTGACGCCGC AGGATTTACC GAGATCATCG AGGCCGTCTC GGGGATCGAG GAAGTCGAGG AAACGCTCGA GGACATTACC GGCGAAAACG ACCAGCCGGC GGAAAGCACA GCGGCAACAG CAGACGAGAT GGCCGACGAA GCCGGTCTCC CCGAAGATGC CGAGCCGGAA AGCGACGCAG GCGTGATCGA CAGCAGCGCG GATGAGGCCC ACGAGCCTGC CGCGATCATC GAGGACGACC TTGCCTCCGT CACGCAGACG GTGGAAACGG CGACGACGGC GGAACCGCCT GTCGAAACCG GCGAAACGCC TGTCGACGCG GCGCCGGAAG CCGTTCACGA AGAGCCCGTC GTCGCACCGC CTATGGTCGC CGACGCCTCC CCTGCTCCTG AGCTTGTGGC TGCGCCCGGC TTCATCTTCA GGCCGAACAG CCGCGCCACG CGCTTCGTCT GGAAGATCGA TGCCGAGGGC CGGTTCAACG AGGTCAGCCA CGAATTTGCC GAGGCCGTCG GTCCGCATGC CTCCGAGATT ATCGGCTCTG CCTTCGGCGA TGTCGCCGCC CTCTTCAATC TCGATTCCGA CGGCAAGCTT GCCGAAGCGC TCGCCCGCCG CGACACATGG TCTGGTAAAA CCATTCTCTG GCCGGTCGAA GGCACAAGCC TCGTCGTTCC CGTCGATCTG GCGGCGCTGC CGACCTATAC CCGCAACCGC GACTTCGACG GTTTCCGTGG CTTCGGCGTC GTCCGGCTTT CCGATGCGCA GGAAGATCCG CTGGCGCTCG GCCTGACGCT CGGCCCGGAT GGGGTCGGCC ATGATGCGGC AAGCCTCGGC CCGGTGACCG AGACCGTTGC CGAGGCGGCA CTCGAGGTGC CGGCAGCGCA GGAAGAAGCC CCGAGCGAAC CCGCCCTGAC GGATGAGGTC GAGGACAAGG CGCTTGCGGC AAGCGAGCCG CAGCCGGAGA CGGAGCCTGA GGAGATTACC GCCGAGCAGG CATCTGGTGA GCGGGCGGCC GACGAACCGC CTTTCCAGCA AAGCGCTTCA GAAACAGCAG ACGATAGCGC GGAGTCCGGC GATATCTCCG CTGTCGATCC CGCAGCGGAA ATGTCGAACG AGCCGCCGGC GCTTCGCATT TCGGAAACGC CCAACCGGCG TTTCTCCGAC AAGATCGTTC AGCTCCATAA CAGCGGCGCC GCATTGACGG CCGCCGAACA GGCCAATTTC CGCGAGATCG CCAAGCGTCT CGAGGCTTTC GGCGCCAGCA AGGACGAACC TGCTGGACCG GGACGGAGTG ACCCCGCCGC CACGGAAACG GCGAGCTTTG AAGAGGCTTC TGGGGCCGAA GACCTCAAGG CCGAAACACC CATTGCCGAC AAGGCGGAAG CGCCGTCGCT CGAGGAGATC GCGCCGCAGG AAGCGATTTT CGAGAATGCC GCGGACGCCC AGCGCGACGA CGACGCTCGC GAGGACGATG CCAGTGTCGA GGCGACTGAC GACATAGATG AGGACGAAGC GACGGAAGGG CTGGAGGAGA CGGTCAGCCA GATCGAGGTT CTGACAAGCT TCATCCCGCC GCGCGTCAAG ATGACGGACG GGCTTTCGCT GGGAACGGTC GACCAGTTGC CGGTCGCGGT ACTTATCCAT GTCGGCGATG CGCTGCTCCA TGCCAATCCG GAATTCATGC GGTTGACCGG CTACACCTCG CTCGACGCAT TGCGCGAGGT CGGCGGCATC GAAGCCCTGC TGCAGCGCCG CGAACTCGAG GAAAAGGCCG CAGGCTCCGG CACCATGATG CTGGTCAAGG CCGACGACAG CCTGGTGCCG GTGACGGCGC GGCTGCAATC GGTGCGCTGG GAAGACGCCA ACGCGCTGAT GCTGGCGCTG ATGCCGGTGG AAGGCAAGGA AGAGGGCCGC AGCGATGCAG GCCGTTCCGA GGGCCGGACG GAAGCGCGGC CCGAGCGGAT GGTCGAGAAG GTCGCCAAGC TGCAGGTCGA AGTGGAGGAA TTGCGCTCCA TCCTGGAAAC GGCGACCGAC GGCGTCGTCG TTATCGGCAC GGAGGGCGAT ATCCGCTCGA TGAACCGGTC GGCGAGCGCG CTTTTCAATT ACGACGAGCA GGAGACGCGC GGCAAACCCT TCGTCATGCT GTTTGCCCAT GAGAGCCAGA AGGCTGTGCT CGACTATCTC CACGGCCTGT CCGGCCATGG CGTTGCCAGT GTGTTGAACG ACGGGCGCGA AGTGATCGGC CGCGAAGCCG CCGGCGGTTT CGTGCCGCTG TTCATGACGA TGGGCCAGCT CACCTCCTCC AACGGCTATT GCGCCGTCAT CCGCGATATC ACCCAGTGGA AGCGCACCGA GGACGAACTG CGCAACGCCA AGGGCGCGGC CGAAACTGCC AACGCCCACA AGACCGATTT CCTTGCCCGC GTCAGCCACG AGATCCGCAC GCCGCTCAAC GCCATCATCG GTTTTTCCGA TATGATGGCC GGCGAGCGCT TCGGGCCGAT CGGCCATCCG CGTTATATCG AATATGCCAA CGACATCGGC CGCTCCGGCC GGCACGTGCT CGATATCGTC AACGACCTGC TCGATATTTC GAAGATCGAG GCGGGCGAGA TGGATCTCGA TTTTGCCGCC GTCGGCCTCA ACGAGGCGGT CTCCGAAGCA GTCGCCCTGG TGCAGCCGCA GGCGAACGGC CAGCGCGTCA TCATCCGCAC GGCGCTGTCG CATGCGGTGC CCGAGGTCGT GGCGGATCTG CGCTCGATCA AGCAGATCGC GCTCAACATC CTGTCGAACG CCATCCGTTT CACCCCATCC GGCGGGCAGA TCGTCGTTTC CACCTCCTAT GAGGCGAATG GCAGCGTCGT GCTGAGGGTC CGCGATACAG GCATCGGCAT GACGCGCAGC GAACTCGACC AGGCGATGAA GCCGTTCCGG CAGGTCTCCT CGACCCAATC GCGCCATCGC GGCGACGGTA CCGGGCTCGG GCTGCCACTG ACCAAGGCGA TGGTCGATGC CAATCGCGCG GTGTTCTCGA TCAATTCGGC GCCGAACGAG GGCACGCTCG TCGAGATCAC CTTTCCATCG CAGCGGGTGT TGGCCGGCTG A
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Protein sequence | MPAVQYPFID IAVHARVRER FSRGEAMVLF SADLARLLWA NGAGAELFGH AAVYDLLDQG VDRTDITFRQ LETAARQLAD IGDHRSLMIR VAKGFQRVQV QAAAELIRLS TGEKAMLFSV PVSAKPLTSG ASAAQMLQGL DDPDTHMAVI GADGDVIAAS PGFASLGISA QTAKTLINLA GAHPDRLVKR PVATGRGNLP AAVGKLSDEP ALNLLFAVET AIGHLDPIDA AASDPIDTPA LDLIDTPVQE ESVPPAEDFR DESVDAAGFT EIIEAVSGIE EVEETLEDIT GENDQPAEST AATADEMADE AGLPEDAEPE SDAGVIDSSA DEAHEPAAII EDDLASVTQT VETATTAEPP VETGETPVDA APEAVHEEPV VAPPMVADAS PAPELVAAPG FIFRPNSRAT RFVWKIDAEG RFNEVSHEFA EAVGPHASEI IGSAFGDVAA LFNLDSDGKL AEALARRDTW SGKTILWPVE GTSLVVPVDL AALPTYTRNR DFDGFRGFGV VRLSDAQEDP LALGLTLGPD GVGHDAASLG PVTETVAEAA LEVPAAQEEA PSEPALTDEV EDKALAASEP QPETEPEEIT AEQASGERAA DEPPFQQSAS ETADDSAESG DISAVDPAAE MSNEPPALRI SETPNRRFSD KIVQLHNSGA ALTAAEQANF REIAKRLEAF GASKDEPAGP GRSDPAATET ASFEEASGAE DLKAETPIAD KAEAPSLEEI APQEAIFENA ADAQRDDDAR EDDASVEATD DIDEDEATEG LEETVSQIEV LTSFIPPRVK MTDGLSLGTV DQLPVAVLIH VGDALLHANP EFMRLTGYTS LDALREVGGI EALLQRRELE EKAAGSGTMM LVKADDSLVP VTARLQSVRW EDANALMLAL MPVEGKEEGR SDAGRSEGRT EARPERMVEK VAKLQVEVEE LRSILETATD GVVVIGTEGD IRSMNRSASA LFNYDEQETR GKPFVMLFAH ESQKAVLDYL HGLSGHGVAS VLNDGREVIG REAAGGFVPL FMTMGQLTSS NGYCAVIRDI TQWKRTEDEL RNAKGAAETA NAHKTDFLAR VSHEIRTPLN AIIGFSDMMA GERFGPIGHP RYIEYANDIG RSGRHVLDIV NDLLDISKIE AGEMDLDFAA VGLNEAVSEA VALVQPQANG QRVIIRTALS HAVPEVVADL RSIKQIALNI LSNAIRFTPS GGQIVVSTSY EANGSVVLRV RDTGIGMTRS ELDQAMKPFR QVSSTQSRHR GDGTGLGLPL TKAMVDANRA VFSINSAPNE GTLVEITFPS QRVLAG
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