Gene Rleg2_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0378 
Symbol 
ID6979092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp386567 
End bp387385 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID643395090 
ProductOrnithine carbamoyltransferase 
Protein accessionYP_002279903 
Protein GI209547986 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0255644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00261516 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAAT GGACCCGCTT CAACATCGTC TCCGTCACGC TCGGCTTTGC CTTCCTTTAC 
CTGCCGATCG TGCTTCTGGT GATCTTCTCC TTCAACGAAT CGAAGCTCGT CACCGTCTGG
GGCGGCTTCT CAACCAAATG GTATGTCTCG CTGCTCTCCA ACCAGGGCCT GCTCGACGCC
GCCTGGGTGA CGATCCGTGT CGGCCTGCTG TCGGCAACGC TCGCCACCAT CCTCGGCACG
ATGGCGGCGC TGACGCTGGT GCGCTACACC CGCTTTCGCG GACGCATGCT GTTTTCCGGC
ATGATCTACG CGCCGCTGGT CATGCCCGAC GTCATCACCG GCCTGTCGCT GCTGCTGCTC
TTCGTCGCGA TCGGCTTCGA CCGCGGTTTC TGGACGATCA CGCTGGCGCA TACGACGCTG
ACCATGTGCT TCGTCGCCGT CGTCGTGCAG TCTCGCCTCT TAAGCTTCGA TCGCTCGATC
GAGGAAGCGG CGCAGGATCT CGGCGCGCCG CCGGTGCGCA CCTTTTTCGA GATCACCCTG
CCGATCATCG CGCCGGCCGT GGTCTCAGGC TGGATCCTGG CCTTCACCCT GTCGCTCGAC
GATCTGGTGA TCGCGAGCTT CACCTCGGGG CCGGGCGCCA CCACGCTGCC GATGCGGATC
TACAGCCAGG TGCGCCTCGG CGTGACGCCG GAGATCAACG CGGTCTGCAC CATCTTGATC
GGCATCGTTG CGGTCGGCGT CATCTGCGCC TCGATCGTCA CCAAGCGCCG TGAAATCCAG
CGCCAGCGGG ACGAGCGTGC GGCGGCGGCC GGTGCTTAA
 
Protein sequence
MLKWTRFNIV SVTLGFAFLY LPIVLLVIFS FNESKLVTVW GGFSTKWYVS LLSNQGLLDA 
AWVTIRVGLL SATLATILGT MAALTLVRYT RFRGRMLFSG MIYAPLVMPD VITGLSLLLL
FVAIGFDRGF WTITLAHTTL TMCFVAVVVQ SRLLSFDRSI EEAAQDLGAP PVRTFFEITL
PIIAPAVVSG WILAFTLSLD DLVIASFTSG PGATTLPMRI YSQVRLGVTP EINAVCTILI
GIVAVGVICA SIVTKRREIQ RQRDERAAAA GA