Gene Rleg2_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0377 
Symbol 
ID6979091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp385652 
End bp386563 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content60% 
IMG OID643395089 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002279902 
Protein GI209547985 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00142926 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00113268 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAGC TCACATCCGG CCTCTACAAC CGGCTCGTCA TCACCATCCC TTATGCCTGG 
CTGCTGCTCT TCTTCCTGGC GCCGTTCTTC ATCGTCTTCC GCATTTCGCT GTCGACGACG
GCAATCGCCA TGCCGCCTTA CGAGCCGGTT TTCTCGCTTG CCGACGGCTG GGCCGGGCTC
TGGAGCAAGA TCGGAGAGCT GTCTTTCGAC AATTACGCCT ACCTCACCGA CGACGCGCTC
TATTTCAATG CCTATATCTC GAGCGTGGTA ATTGCCGGGA TCTCCACCTT CCTCACATTG
CTGATCGCCT ATCCGATCGC CTATGGCATG GCGCAGGCGC CGCGCACCAT CCGCCCGACG
CTGGTGATGC TGGTCATCCT GCCGTTCTGG ACGAGCTTCC TGATCCGCGT CTATTCCTGG
ATCGCGATCC TGAAGCCGGA AGGGCTTCTC AACCAGCTTC TCCAGTCGCT GCACATCATC
GACAGCCCGC TGATCATCCT CAACACCACC ACCGCCGTCT ATATCGGCAT CGTCTATTCC
TATCTGCCGT TCATGGTCCT GCCGCTCTAT TCAGCGCTGG AAAAGATGGA CGGCACGCTG
ATCGAGGCTG CACAGGATCT CGGTTGCACC CCGATCAGGG CCTTCTGGCG TGTCACCTTT
CCGCTGTCGA TCCCCGGTGT GGTGGCCGGC TGCATGCTGG TCTTCATTCC CGCTGTCGGT
GAATTCGTCA TTCCCGACCT GCTCGGCGGT TCGCAGACGC TGATGATCGG CAAGACGCTC
TGGAACGAGT TCAACGCCAA CCGCGACTGG CCGGTCTCCT CCGCGGTGGC GACGATCCTG
CTGATGATCC TGGTGATCCC GATCGTCTTC TTCCAGAACG CCCAGGCCAA GGCCGAAGAG
CGGGGGAAAT AA
 
Protein sequence
MGKLTSGLYN RLVITIPYAW LLLFFLAPFF IVFRISLSTT AIAMPPYEPV FSLADGWAGL 
WSKIGELSFD NYAYLTDDAL YFNAYISSVV IAGISTFLTL LIAYPIAYGM AQAPRTIRPT
LVMLVILPFW TSFLIRVYSW IAILKPEGLL NQLLQSLHII DSPLIILNTT TAVYIGIVYS
YLPFMVLPLY SALEKMDGTL IEAAQDLGCT PIRAFWRVTF PLSIPGVVAG CMLVFIPAVG
EFVIPDLLGG SQTLMIGKTL WNEFNANRDW PVSSAVATIL LMILVIPIVF FQNAQAKAEE
RGK