| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0376 |
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| Symbol | |
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| ID | 6979090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 384505 |
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| End bp | 385647 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643395088 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_002279901 |
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| Protein GI | 209547984 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000938132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00113993 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTCTC TCGGCAATAT CCGCCGCGCT TTTGCGCCTT GGACCGATCC CTCTGCAAAA
CCCTTCATTG CTTTCAAGAA TGTCACCAAG CGCTTCGGCG ATTTTACCGC CGTCGACGAT
CTGTCGCTGA ATATCTATCA CCGCGAGTTC TTCGCGCTGC TCGGCGCTTC GGGCTGCGGC
AAGTCCACGC TGCTGCGCAT GCTCGCCGGC TTCGAGCAGC CGACTTCCGG CGAAATCGTG
CTCGACGGCA CGGATATGGC CGGCACGCCG CCCTACAAGC GGCCGGTCAA CATGATGTTC
CAGTCCTATG CACTTTTCCC GCACATGACG GTTGAGAAGA ATATCGCCTT CGGCCTGAAG
CAGGACGGTA TGGGCAAGGA TGAAATGACT GACCGTGTTG CGCAGATGCT GAAGCTCGTC
AAGCTCGAGC AGTTCGCCTC GCGCAAGCCG AACCAGCTTT CCGGCGGCCA GCGCCAGCGC
GTGGCGCTCG CCCGCTCGCT CGCCAAGCGC CCGAAGGTGC TGCTGCTCGA CGAACCGCTC
GGCGCGCTCG ACAAGAAGCT GCGCGAGGAA ACCCAGTTCG AACTGATGGA TCTGCAGCAG
AGCCTCGGCC TGACCTTCGT CGTCGTCACC CACGACCAGG AAGAGGCGAT GACCATGGCC
GACCGCATCG CCGTCATGAG CCATGGCAAG GTCGTGCAGG TGGCCACACC GGCGGAGATC
TACGAGGCGC CGAATTCCCG CTTCGTTGCG GATTTCATCG GCGACGTCAA CATCTTCGAC
GGCAAGGTCG CCTCATCGGG CAACGGCACC GTCGAGATAT CGGTCGACAG CGGCTTCAGC
GTGCGCGTCG CCGCCTCCGA GACACCGCCG GCCGGCAGCG CCGTCGGCTT CGCCATCCGG
CCGGAAAAGA TGCGGGTCTT GCGTCAAGCG CCCGCCAATG CTTCGGTCAA CGCCGCCCGC
GGAGAGCTCT GGGATATCGC CTATCTCGGT GACATGACCG TCTTCCATGT GAAATTGCAG
AGCGGCAAGA TCGTCAAGGC CTCGTCCCTC AATGCGCAAC GCTCCGTCGA CGACCCCTTC
ACCTACGACC AGGAAGTCTG GATCTCGTTC GACGAGAACG CCGGCGTTCT CTTGAAGGAT
TGA
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| Protein sequence | MKSLGNIRRA FAPWTDPSAK PFIAFKNVTK RFGDFTAVDD LSLNIYHREF FALLGASGCG
KSTLLRMLAG FEQPTSGEIV LDGTDMAGTP PYKRPVNMMF QSYALFPHMT VEKNIAFGLK
QDGMGKDEMT DRVAQMLKLV KLEQFASRKP NQLSGGQRQR VALARSLAKR PKVLLLDEPL
GALDKKLREE TQFELMDLQQ SLGLTFVVVT HDQEEAMTMA DRIAVMSHGK VVQVATPAEI
YEAPNSRFVA DFIGDVNIFD GKVASSGNGT VEISVDSGFS VRVAASETPP AGSAVGFAIR
PEKMRVLRQA PANASVNAAR GELWDIAYLG DMTVFHVKLQ SGKIVKASSL NAQRSVDDPF
TYDQEVWISF DENAGVLLKD
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