Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0371 |
Symbol | |
ID | 6979085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 379122 |
End bp | 379991 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643395083 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002279896 |
Protein GI | 209547979 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.283636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00259911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG CGAATTGGGA TTCCTACCAG CTTTTCCTGC AGGTCGCCCG CCTCGGCGGC CTGACGGGGG CAAGCACGGC AAGCGGGCTC AGCCCTGCGA CCGTCGGCCG GCGCATGCTC GATCTCGAAC AGGAGGTCGG CCGCGCCTTG TTTTCGCGCA GCCAGACCGG CTACCGCCTG ACCCAGGACG GCCAGGCGCT GCTCGATCAC CTTCAGGAGA TGGAGGCCGC CGCCCGCAAG GTGGAGGCGT GGCGGCAATC GGGCGAGGGC GGCACGACCG TCAGGATCGC CGCCGGCACC TGGGTCGCCT GGCTGCTGAC CGAGAATTTC GCCGCCGTCC GCATGCCGGG CGATGGCTTT GCCATTTCGC TCACCATCGG CGAGGCGCGG GCGAGTCTTG CCTATCGCGA GAGCGATATC GGTATTCGCG CCTTCGAGCC GGAGGAGGCC AATCTTGCCG CCCGCCGGCT CGGCGAGGTC GCCTATGCCC TCTATATCAG GCGCAACGCT GCCGAGACCG ATGAGCGCTG GATTGCCGTG GCCGAGGAGG AGGCGATCTC CGCCTATCTG CGCTGGCCGC ATGCCAATGC CGCCGCCGGG ATCGTCGCCA CCGTCAACCG GCCGCGTTCG CTGCCCGATC TGGTGCGCGC CGGCGCCGGC AAGGCAGTGC TTCCCTGTTT TGTCGGCGAT CTGCATCCCG ATTTGCAGCG CCTTGGCGGC GAGCTCCCGG AATTGCGCCA CGCGCAATGG ATCGTCATGA ACGCCGAGGA CCGCCATCGC CCGGAGATCC GCACGGTCGC CGACCGCATG ACCAAGCTGA TCAGAAGTTA TGCCGATCTC TTCGCCGGAA AACGGCCGAG CCGCGGCTGA
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Protein sequence | MKNANWDSYQ LFLQVARLGG LTGASTASGL SPATVGRRML DLEQEVGRAL FSRSQTGYRL TQDGQALLDH LQEMEAAARK VEAWRQSGEG GTTVRIAAGT WVAWLLTENF AAVRMPGDGF AISLTIGEAR ASLAYRESDI GIRAFEPEEA NLAARRLGEV AYALYIRRNA AETDERWIAV AEEEAISAYL RWPHANAAAG IVATVNRPRS LPDLVRAGAG KAVLPCFVGD LHPDLQRLGG ELPELRHAQW IVMNAEDRHR PEIRTVADRM TKLIRSYADL FAGKRPSRG
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