| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0305 |
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| Symbol | fliF |
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| ID | 6979019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 310576 |
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| End bp | 312267 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643395017 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002279830 |
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| Protein GI | 209547913 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.243877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGT TAAATCAATT AGTTCAGATC TTTAAGAACT TCGGTTCCCT TGGCCGAACA
CGCCTGATGA TTCTCGGAGG CGTCGGTGCC GTCTCCATCG CAATCGTCCT TGCGGCCGCC
CTTTTCGTCA ACAAGCCGGC ACAGGAAACG CTCTATGTCG GTCTGGATTC GCCCGATCTC
AACCAGATCA GCATGGCGCT TGCCGAAGCC AACGTCGATT TCCAGGTCGG CACTGATGGT
ACCAGCATCA GCGTCCCCGC GGGGATGACG GGCAAGGCCC GCCTGTTGCT TGCCGAGCGC
GGCCTGCCGA ACAGCGCCAA TGCCGGTTAC GAACTCTTCG ACAATGTCGG CTCGCTGGGC
CTGACCTCCT TCATGCAGGA GGTGACGCGG GTTCGAGCGC TGGAAGGCGA AATCGCCCGC
ACCATCCAGT CGATCTCGGG CATAACAGCG GCGCGCGTTC ATATCGTCAT GCCGGAGGTC
GGAAACTTCC GGAAGGCGGA GCAGAAGCCG ACCGCCTCCG TCATGATTCG CGCCAGCGCC
ACCACCGGGC GCAGTGCTGC GACCTCGATC CGCCACCTCG TCGCCTCGGC CGTGCCGGGG
CTTGACGTCG ATGACGTGAC CATCCTCGAT TCCGCCGGTC AGCTGCTCGC TTCCGGCGAC
GAAGCTAGCA ACAGCTCGCT GAACCGATCG CTCAATATCG TCCAGAACGT CCAGCAGGAA
GTCGAATCCA ACATCGACAA GGCGTTGGCC CCCTTCCTCG GCATGGACAA CTTTCGCTCC
AGCGTCACCG CCGATCTCAA CACTGACGCC CAGCAGATCC AGGAAACCAC CTACGATCCC
GAATCCAAGG TCGAACGCTC GGTCCGCTCG ACCAAGGAAG CCCAGCAGTC GCAGCAGAAG
CAGTCCGACA GCGCGACGAC GGTCGAGCAG AATATTCCGC AGGCGGCTCC CGAGGCCGGT
GGTTCGGCCG GGCCTGAATC GCAGGACAAG TCCGACAAGC GCGAAGAGCA GACCAATTAC
GAGATCAACA GCCGGACGAC GGCGACGACC CGCAACAGCT ACAAGGTCGA GAAGCTCTCG
ATCGCCGTGG TGGTCAATAA GGGCCGCATC GCCAAGATGG TCGGCGAGCC GGCCGATCAG
GCCAAGATCG ACGCCTATCT TGCGGAAATG CAGAAGATCG TCGCTTCGGC GTCCGGCATC
GACGCCAAGC GCGGCGACGT CGTCACCGTC ACGGCCATGG ACTTCCTCGA GAACCAGCTG
CTCGAAGACG CCACCGGCGG TGTCCGCGTC ATGGATATGC TGAGCCGCAA CCTGGCCGGC
ATCATCAACT CGCTGGCCTT CGTCGCGGTC GCCTTCGTGG TGGTCTGGAT GGGCCTGCGG
CCTCTGGTGC GCAGCGTCAG CGGCAACGGC AGCTCTTCGG TTCTCGGCGA CGCCACGCCG
GAGGCGGCCG GCCTCGAGCT TCCGGACTTC GCGCCGGCAG CCGGCGCTTC CGGAGGAGCC
CTCATGGACG GCTTCGGATC CGACTTCGGC TTCGACAGCA CCGAGGATCT GCTCAGCCTC
GGCGACGACG ACGGCAACTT CAACCGCCGC GTCAAGGAAG GCCCGGAACG CAAGCTGTCC
CGCATGGTCG AGATCAACGA GGAACGCGCC GCGAAAATCC TCCGGAAATG GGCGATCGAC
GAAGCAGCGT AA
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| Protein sequence | MNLLNQLVQI FKNFGSLGRT RLMILGGVGA VSIAIVLAAA LFVNKPAQET LYVGLDSPDL
NQISMALAEA NVDFQVGTDG TSISVPAGMT GKARLLLAER GLPNSANAGY ELFDNVGSLG
LTSFMQEVTR VRALEGEIAR TIQSISGITA ARVHIVMPEV GNFRKAEQKP TASVMIRASA
TTGRSAATSI RHLVASAVPG LDVDDVTILD SAGQLLASGD EASNSSLNRS LNIVQNVQQE
VESNIDKALA PFLGMDNFRS SVTADLNTDA QQIQETTYDP ESKVERSVRS TKEAQQSQQK
QSDSATTVEQ NIPQAAPEAG GSAGPESQDK SDKREEQTNY EINSRTTATT RNSYKVEKLS
IAVVVNKGRI AKMVGEPADQ AKIDAYLAEM QKIVASASGI DAKRGDVVTV TAMDFLENQL
LEDATGGVRV MDMLSRNLAG IINSLAFVAV AFVVVWMGLR PLVRSVSGNG SSSVLGDATP
EAAGLELPDF APAAGASGGA LMDGFGSDFG FDSTEDLLSL GDDDGNFNRR VKEGPERKLS
RMVEINEERA AKILRKWAID EAA
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