| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0228 |
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| Symbol | |
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| ID | 6978940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 234691 |
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| End bp | 236652 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643394939 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002279754 |
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| Protein GI | 209547837 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT TTCTGGCCTC ATTGCAGCTG CAAAAAGACA ACCCGACGCT TCTGACGGCG
CAGTTTCGGG CTCTGTCGTC GCAGATCCCC ATTCTCTATG TTCTCCTGGT CATCAACGCC
CTTGCGGTGG CGATCACCCA CCTTGAATCC GCGCCGCTCT GGCTCTCGCT CTATATCCCT
GTCGCCTTGA GCATCGTCTG TGTCTTCCGA CTCTGCTGGT GGGAGATCAG GGGCAAGGAG
AACGTCACAG CCGAGCGCGC CTACCGGCTG ATGAAGATCA CCATATCGGG CGCCGCTATC
CTGACCATCG CTTTCGGCGG CTGGGCGATC GCGCTTTACC AGTATGGCGA TGCGTCTCAG
CAGGGCCAGA TCGCCTATTT CCTCGTCGTC ACCGGCATTT CCTGCATCTT TTGCCTGATG
CATCTGCCGA TGGCGGCAGC GCTGACGACG GTCATCACCT TCTCGGCCAT GATCGCCACC
TTCATGTTCT CGGGCAATCC TGTTTTCGTC GCGACGGCCG TCAGCGGCCT CTTCCTGATC
GTGCCCTTCC TCAGGGTGAT CGACAGCTAT TTCCAGAATT TCGTCGGCCT GGTGCAATTG
ACCGAGGAGC TGAAGCAGAA GCGGGCGGAA GCCGAGGAGC TCAACCTCGT CAACAGCCGC
AACGCGCTGC AGGACCAGCT GACCGGCCTT GCCAATCGCC GCAGCTTCTT TCTCTCGCTG
GAAAAACGGC TGCAGAAGGA TCCGTCCGCG CCGCCCGTTC TCGGCATTCT CGATCTCGAC
GGCTTCAAGC CCGTCAACGA TGTTTTCGGC CATGCCGCCG GCGATCTTGT GCTCAAGGAG
ACGGCCCGCC GCTTCGCCGC ACTGGTCGGC GAAGCGGGCA TCGTCTCCCG CCTCGGCGGC
GACGAGTTCG GCATCATTTT CCCCTGTTCG ATGACACGCC AGGCGATTGC CGATCTCGGC
CAGGCGCTCT GCGCCGCGGT CCGCGACCCT TACGAAATCC CCGACGGCTC GGTCCGCGTT
TTCGGTTCCT GCGGCATCGT CTATCCCGAG ATCGGCAGAT ACACCGCCGA GGATCTTTAT
GAGAAAGCCG ATTTTGCCCT CTACCAGGTC AAGAGCAAGC GCAGCAGCGG CGTCGAATTC
TTCTCGGCCG AGCACGAGAA GATCCTGACC CAGCGCCACC TGATCGAACT CGAGCTGCAG
GCGAATGATT TTGCCAGCGA ATTGAAACTC GAATATCAGC CGATCGTCGA ATTGAAGAGC
GGCCGCGTCG TCGGTTACGA GGCGCTGGCC CGCTGGGACA GCGCCCGCTT CGGCCGCATC
AGCCCCGAAG CTTTCATTCC CGCGGCCGAG CGCACCGCCG TCATCGGCCG GATGACGCGC
ATCCTTTTTG CCAAGGCGCT CGAAGCGCTG GCAATCATTC CCCGCCACCT CAAGCTGTCC
TTCAATCTCT CGGCCCGCGA TATTTGCGAC CATGAGACAT CGATGGCGCT GCTTGGCATG
ATCACTCGCT CCGGCATCGA TCCCCGGCGC ATCGAATTCG AGATCACCGA GACGGCGCTG
CTCTCCGATT TCGACACCGC CGACAAGGTC ATCGCAATGC TGCGCGCGGC CGGCATCTCG
ATCGCGCTCG ATGATTTCGG CACCGGCTAT TCGAGCCTCA GCCATATCCA CCGTCTCGGC
TTCGACAAGC TGAAGATCGA CAAGGCCTTC GTGATGAATT TCGATCGCGA CGCCCGTTGC
ATGAATATCA CCCGCTCGGT CGCCAATCTC TGCCAGAATC TCGGCATTGC CTCCGTTGCC
GAAGGCGTCG AAAGCGAAGG GATCGCCGAG GGATTGAAGG CGATGGGCGT TCGCCTGGCG
CAGGGCTATC ATTTCTCGCG GCCGCTGCCG CTGGAGCTTG CCATCGACTA CGCCGCCCGC
TGCGAAGCCG AAGCCATTGC CCGCAATTCG CTGTCGGCCT GA
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| Protein sequence | MKKFLASLQL QKDNPTLLTA QFRALSSQIP ILYVLLVINA LAVAITHLES APLWLSLYIP
VALSIVCVFR LCWWEIRGKE NVTAERAYRL MKITISGAAI LTIAFGGWAI ALYQYGDASQ
QGQIAYFLVV TGISCIFCLM HLPMAAALTT VITFSAMIAT FMFSGNPVFV ATAVSGLFLI
VPFLRVIDSY FQNFVGLVQL TEELKQKRAE AEELNLVNSR NALQDQLTGL ANRRSFFLSL
EKRLQKDPSA PPVLGILDLD GFKPVNDVFG HAAGDLVLKE TARRFAALVG EAGIVSRLGG
DEFGIIFPCS MTRQAIADLG QALCAAVRDP YEIPDGSVRV FGSCGIVYPE IGRYTAEDLY
EKADFALYQV KSKRSSGVEF FSAEHEKILT QRHLIELELQ ANDFASELKL EYQPIVELKS
GRVVGYEALA RWDSARFGRI SPEAFIPAAE RTAVIGRMTR ILFAKALEAL AIIPRHLKLS
FNLSARDICD HETSMALLGM ITRSGIDPRR IEFEITETAL LSDFDTADKV IAMLRAAGIS
IALDDFGTGY SSLSHIHRLG FDKLKIDKAF VMNFDRDARC MNITRSVANL CQNLGIASVA
EGVESEGIAE GLKAMGVRLA QGYHFSRPLP LELAIDYAAR CEAEAIARNS LSA
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