| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0216 |
|---|
| Symbol | |
|---|
| ID | 6978928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 218302 |
|---|
| End bp | 220515 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394927 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002279742 |
|---|
| Protein GI | 209547825 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.97632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACA TAAATTTCAC GCTCGAAACC GACGCCGACG GCATCGCTCT CGTCACTTGG
GACATGCCCG GCAAATCGAT GAACGTCTTC ACATCAGAGG TGATGGCCGA ACTCGACGCC
ATCATCGACG CCACCACCGC TGATGCCGCC GTCAAGGGCG TCGTCTTCAC CTCGGGCAAA
TCCTCCTTCT CCGGCGGTGC CGATCTGTCG ATGATCAAGT CGATGTTCGG TTCCTATCAG
GACGAAAAGG AAAAGAGCCC GGAGACGGCG GTGCAGACGC TCTTCGGCCT GGTCGGGCGC
ATGTCCGGCC TGTTCCGCAA GCTCGAAACA TCGGGCAAGC CCTGGGTTTC CGCCATCAAC
GGCACCTGCA TGGGCGGGGC TTTCGAACTG TCGCTCGCCT GCCATGGCCG CGTCGCCTCC
AATGCCAAGA GTGTCAAGAT CGCGCTGCCC GAGGTGAAGG TCGGCATCTT CCCCGGCGCC
GGCGGCACCC AGCGCGTGCC GCGGCTGGCC AATGCCCAGG ATGCGCTGCA GATGATGACG
ACCGGCCAGT CGCTGAGCGG CTCCCGCGCC AAGGCGATGA ACCTCGTGCA TCAGGTGGTC
GAGCCGGATC AGTTGATCCC CGCCGCCAAG CAGATGATCA AGGACGGCCT GAAGCCGGTC
GCCCCCTGGG ACGAGAAGGG CTTCAAGCTG CCGGGCGGCG GCATCTGGAC ACCGGCCTCG
GCCCAGCTCT GGCCGGCCGC ACCCGCAATC CTGCGCCGCG AAACATCCGG CAATTATCCG
GCAGCGCTCG CCATTCTGAA ATGCGTCTAT GAAGGCCTGC AGCTGCCGTT CGACACCGGC
CTGAAGATCG AGCAGCGTTA TTTCACCGAA GTGCTGCAGA CCCGCGAAGC CTTCTCGATG
ATCCGCTCGC TGTTCATCTC CATGCAGGAG CTCGGCAAGG GCGCCCGCCG CCCGGCAGGC
ATCCCCAAGA CCGAGCTGAA GCATGTCGGT GTCGTCGGCG CCGGTTTTAT GGGCGCCTCG
ATCGCCTATG TCACGGCTGC CGCCGGTCTG GCGGTGACGC TGATCGACCG CGACATGGAG
GCGGCTGCCA AGGGCAAGGC CGTCTGCGAA GGTCTCGTCA AGGATTCCGT CGGTAAGGGA
CGGTTTACGC AGGACGAGGC CGCAGCCCTT CTTGCCCGCA TCACGCCCTC GGCCAATTAT
GCCGATCTCG CCGCTGCCGG CCTGGTCATC GAGGCGGTGT TCGAGGATCG CGAGGTGAAG
AAGGCGGTCA TCGAGGCTGT TGAAGCCGTG CTGCCCGAAG GCGCGATCTT CGCCTCCAAT
ACTTCGACCC TGCCGATATC AGGGCTGGCG AAGAACTCCA AGCGCCCGGC CGATTTCATC
GGCATCCACT TCTTCTCGCC CGTGGAGAAG ATGATGCTGA CCGAGGTCAT CCTCGGCAAG
GCGACCGGCG ACAAGGCGCT CGCCGTCGCG CTCGACTATG TCGCGGCGAT CAAGAAGACG
CCGATCGTCG TCAACGACAC CCGCGGCTTC TTCGTCAATC GCTGCGTGCT GCGCTACATG
TCGGAAAGCT ACGACATGCT GATCGAGGGC GTGCCGCCCA CAATGATCGA GAACGCCGCC
AAGATGGCCG GCATGCCGGT CGGTCCCTTG GCGCTGAACG ACGAGGTTGC CATCGATCTC
TCGCTGAAGA TCCTCAAGGC GACCGTCGCC GATCTCGGCG AGGAGGCGAT CGACCCAAGG
CATATGGACC TCATTTCCCG CATGGTGGAA AAGGAGGGCC GCTTCGGCCG CAAGAATTCC
AAGGGCTTCT ACGATTATCC GCCGAAACCG GCGAAGAAGT CGCTCTGGCC CGAGCTGAAG
ACGCTCTACC CGCAGAGACG CGCGGACGAG GTCGACGTCA ATGTCCTGAA GCAACGCTTC
CTCGTCACCA TCGCGCTCGA AGCCGCCCGC ACCGTCGAGG AAGGCATCGT CACCGACCCG
CGCGAAGCCG ACGTCGGCTC GATCCTCGGA TTCGGCTTCG CGCCCTATAC CGGCGGGGCG
CTGAGCTACA TCGACGGAAT GGGCGCGAAG GCCTTCGTGG AACTGGCGGA GAAGTTAGCG
GGGACTTACG GAGATCATTT CAAGCCGACG CCGCTGCTCA AGGATATGGC TGCCAAGGGT
GAGACGTTTT ATGGGCGGTT TGATCCCTAT GCGGGGGCGA AGGTGGCGGC TTAA
|
|---|
| Protein sequence | MTYINFTLET DADGIALVTW DMPGKSMNVF TSEVMAELDA IIDATTADAA VKGVVFTSGK
SSFSGGADLS MIKSMFGSYQ DEKEKSPETA VQTLFGLVGR MSGLFRKLET SGKPWVSAIN
GTCMGGAFEL SLACHGRVAS NAKSVKIALP EVKVGIFPGA GGTQRVPRLA NAQDALQMMT
TGQSLSGSRA KAMNLVHQVV EPDQLIPAAK QMIKDGLKPV APWDEKGFKL PGGGIWTPAS
AQLWPAAPAI LRRETSGNYP AALAILKCVY EGLQLPFDTG LKIEQRYFTE VLQTREAFSM
IRSLFISMQE LGKGARRPAG IPKTELKHVG VVGAGFMGAS IAYVTAAAGL AVTLIDRDME
AAAKGKAVCE GLVKDSVGKG RFTQDEAAAL LARITPSANY ADLAAAGLVI EAVFEDREVK
KAVIEAVEAV LPEGAIFASN TSTLPISGLA KNSKRPADFI GIHFFSPVEK MMLTEVILGK
ATGDKALAVA LDYVAAIKKT PIVVNDTRGF FVNRCVLRYM SESYDMLIEG VPPTMIENAA
KMAGMPVGPL ALNDEVAIDL SLKILKATVA DLGEEAIDPR HMDLISRMVE KEGRFGRKNS
KGFYDYPPKP AKKSLWPELK TLYPQRRADE VDVNVLKQRF LVTIALEAAR TVEEGIVTDP
READVGSILG FGFAPYTGGA LSYIDGMGAK AFVELAEKLA GTYGDHFKPT PLLKDMAAKG
ETFYGRFDPY AGAKVAA
|
|---|
| |