Gene Rleg2_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0182 
Symbol 
ID6978894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp182128 
End bp183549 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content50% 
IMG OID643394893 
Productputative transcriptional regulator 
Protein accessionYP_002279708 
Protein GI209547791 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.934205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGA CGCAAACGCT GAATCAAACA GCGGTCCAAG ATATTCTCAC CTTGGATGAG 
AGCCACTTCA TCGATTTTAA AGCAATCGAA ATCGCGCCGG CGAAGCTAAC GAAAACGATC
TCTGCGTTCG CCAATACAAG TGGAGGCGAG GTGTATATTG GGATCTCGGA AGTAGAAGGA
GAAGATGGCA AGACGGTCGA ATGGCGGGGG TTCGACAAAC CTGAGTCTGC GAATGCCATC
GTTCAAGTCT TGGAGAATCT TGGGCCATTA GCCAACAACT ACATGGCCGA GTTTTTGCGA
TCGGAAACCG AAATTGGATA CGTGCTCCAT CTCACGGTCT TGAAAACGCA GGACATCATC
ATCGCATCCG ACGGAAAGGT TTATGTCAGG CGGAGCGCGC AAAGTCTGCC GGTCGGCAAT
GACGCTGCTC TGGAGCGCCT GCGATATGAG AAGGGCATAA AATCATTTGA AGATGAAATC
TTGAACGAAG GTCACAAGGA GATATCTAAC TCTAACACTG TGCTTGAATT TCTCCTCGAA
ACCATCCCCA CCGGGGAACC CGAGGATTGG CTTTCGAAGC AACGGGTTCT AGTCGACAGC
AAGCCAACTG TCGCAGGAAT TCTTCTCTTC TCCGATAACC CTCAATCGAT TCTTCCGAAG
CGTTCAGCGA TAAAAATCCT GCGATACCAG ACAAAAAAAG AGGCTGAGCG GGACTTTCTG
GCCTTTGACC CTCTCACAAT GGAGGGACCC CTCTACAATC TTATTTATGA CAGTGTCGAC
AAGGTAAAGG AAATCATCGA GGGAATTGAA AAGCTTGGCG CCGATAAGAT GGAGAAGGTC
TCATACCCTC AAGACGCGCT GCATGAACTC CTGACCAACG CAGTCCTACA TCGCGACTAC
AATATAGCCG CAGATGTTCA AGTGAAGATA TTCGACAATC GGATTGAGAT TGAAAGTCCT
GGCAGGCTAC CTGGTCACGT CACGCCCAAA AACATACGGA AGACACAATT TGCAAGAAAC
CCTAAAATCG TACGTCTAAT CAACAAGTTT CGGAATCCGC CTAATAAAGA CGTTGGCGAA
GGACTGAACA CTGCCTTCGA GGCAATGGGC AAGCTGCGCC TTAAGCCGCC CGTCATTGAG
GAACGAGAGG GTTATGTCGT CGTGACGCTT CGGCACGAGA GTCTCGGGTC GCCCGAACAA
ATGGTAATGG ACTACCTCAA GGATGAGAGC GAGATTACAA ACCTGATTGC CCGAGAGCTA
ACTGGGATTA AATCTGAAAA CTCGATGAAG TCCGTGTTCT ATCGCCTGCG CGAGACGGGC
CAGTTGGAGC AAGTTCCGAA AGTTGCTGGA AAAAAACCGG CTTGGCGGAT ACCCTTGCAG
GTGTCGGCGG AACCGAAGGA CAATCTTGAC GAGGCGCAGT GA
 
Protein sequence
MFQTQTLNQT AVQDILTLDE SHFIDFKAIE IAPAKLTKTI SAFANTSGGE VYIGISEVEG 
EDGKTVEWRG FDKPESANAI VQVLENLGPL ANNYMAEFLR SETEIGYVLH LTVLKTQDII
IASDGKVYVR RSAQSLPVGN DAALERLRYE KGIKSFEDEI LNEGHKEISN SNTVLEFLLE
TIPTGEPEDW LSKQRVLVDS KPTVAGILLF SDNPQSILPK RSAIKILRYQ TKKEAERDFL
AFDPLTMEGP LYNLIYDSVD KVKEIIEGIE KLGADKMEKV SYPQDALHEL LTNAVLHRDY
NIAADVQVKI FDNRIEIESP GRLPGHVTPK NIRKTQFARN PKIVRLINKF RNPPNKDVGE
GLNTAFEAMG KLRLKPPVIE EREGYVVVTL RHESLGSPEQ MVMDYLKDES EITNLIAREL
TGIKSENSMK SVFYRLRETG QLEQVPKVAG KKPAWRIPLQ VSAEPKDNLD EAQ