Gene Rleg2_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0180 
Symbol 
ID6978891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp179370 
End bp180554 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID643394890 
ProductO-succinylhomoserine sulfhydrylase 
Protein accessionYP_002279706 
Protein GI209547789 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01325] O-succinylhomoserine sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.921077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCTGGCGCCC GGCAACCCAA CTCGTCCACG GCGGAACCTT GCGTTCGCAA 
TATGGCGAAA CATCCGAGGC AATCTATCTC ACGCAGGGCT TCGTCTATGA GACGTCGGAA
GCGGCAGAAG CCCGCTTCAA GGGCGAGACT GAAGGTTACA TCTACGCCCG CTACGGCAGC
CCGACCAACG ACATGTTCGA AAAGCGCATG TGCATGCTCG AAGGCGCGGA AGACGCCCGC
GCCACCGCGT CCGGCATGGC GGCGGTCAGC GCAGCCATCC TCTGCCAGGT CAAGGCCGGC
GACCATATCG TTGCCGCGCG CGCCCTCTTC GGCTCCTGCC GCTGGGTGGT GGAAACATTG
GCGCCGAAAT ACGGCGTCGA GTGCACGCTG GTCGACGGCC GGGATCTTGC CAACTGGGAA
AAGGCAATTC GGCCGAACAC CAAGGTGTTC TTCCTGGAAA GCCCGACCAA CCCGACGCTC
GAGGTGGTCG ATATATCAGG CGTCGCCAAG CTCGCCAACC AGATCGGCGC CAAGGTCGTC
GTCGACAACG TCTTTGCGAC GCCACTCTTC CAGAAGCCGT TGGAACTCGG CGCCCATATC
GTCGTCTATT CCGCCACCAA GCATATCGAC GGCCAGGGCC GCTGCCTCGG CGGCGTCGTG
CTTGCCGACA AGGACTGGAT CGACGAGAAC CTGCACGACT ATTTCCGCCA TACCGGCCCG
GCCATGTCGC CGTTCAATGC CTGGACGCTG CTGAAGGGCA TCGAAACGCT GCCGCTGCGC
GTCAAGCAGC AGACCGGGAA TGCGGCGAAG ATCGCCGATT TCCTCGCCGA GCAGAGCAAG
GTCGCCAAGG TGATCTATCC CGGCCGCAAG GACCATCCGC AGGCCGACAT CATCGCCAAG
CAGATGACCG GCGGCTCGAC CCTCGTCGCC TTCGAATTGA AGGGCGGCAA GGAGGCGGCC
TTCGCGCTGC AGAACGCGCT CGATATCGTC AAGATTTCCA ACAATCTCGG CGACAGCAAG
AGCCTGATCA CCCATCCGGC AACGACGACG CACAAGAACC TGACGGAAGA GGCGCGCGCC
GAACTCGGCA TCTCCCCGGG CACGGTCCGC CTTTCGGCCG GCATCGAGGA TACCGACGAC
CTGATCGAGG ATTTCGCCAA GGCGCTTGCC AAGGTCTCGG CCTGA
 
Protein sequence
MSKTWRPATQ LVHGGTLRSQ YGETSEAIYL TQGFVYETSE AAEARFKGET EGYIYARYGS 
PTNDMFEKRM CMLEGAEDAR ATASGMAAVS AAILCQVKAG DHIVAARALF GSCRWVVETL
APKYGVECTL VDGRDLANWE KAIRPNTKVF FLESPTNPTL EVVDISGVAK LANQIGAKVV
VDNVFATPLF QKPLELGAHI VVYSATKHID GQGRCLGGVV LADKDWIDEN LHDYFRHTGP
AMSPFNAWTL LKGIETLPLR VKQQTGNAAK IADFLAEQSK VAKVIYPGRK DHPQADIIAK
QMTGGSTLVA FELKGGKEAA FALQNALDIV KISNNLGDSK SLITHPATTT HKNLTEEARA
ELGISPGTVR LSAGIEDTDD LIEDFAKALA KVSA