| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0143 |
|---|
| Symbol | |
|---|
| ID | 6978853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 138014 |
|---|
| End bp | 138958 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394854 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002279671 |
|---|
| Protein GI | 209547754 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0599498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA TCGAGATCAG CAACGTCACC AAGCGCTATG GTGCTGCCAC CGTCGTCGAC
AATGTCTCGA TGCGCGTCGA AAAAGGTTCG ATCACCGTCA TCGTCGGCAC GTCGGGCTCC
GGCAAATCGA CGCTGATGCG GATGATCAAC CGGCTGGTGC CGATCAGCGA AGGCGAGATC
TTCGTCGGCG GGCAGAATGT CATGGATGTC GAGGTGACCG AGCTCCGCCG CCGGATCGGT
TACGCCATCC AGGGGCATGG TCTTTTCCCG CATCGCACCG TGGCGCAGAA TATCGCCACC
GTGCCGCAGC TTCTCGATTG GGATGCCACA CGTATTTCCA GGCGCGTCGA GGAACTGCTC
GGGCTGTTCA ATCTCGATCC GGCTGATTTC GCCGACAAAT ATCCGCATCA GCTTTCCGGC
GGCCAGCAGC AGCGCGTCGG GGTCGCCCGG GCGCTGGCGG CCGAACCGGA ACTGCTGCTG
ATGGACGAGC CCTTCGGCGC CCTCGACCCT GTTATTCGCG GCAAGGCGCA GGACGACCTG
CTGGCGATCC AGAAGCAGTT CGGCACCACC GTCATTCTCG TCACCCATGA CATGGACGAG
GCCTTCCACC TCGGCAACCA GATCGCTGTC ATGAGCGAGG GCCGGCTGCT GCAATGCTCG
ACGCCGGAAA AGATCCTCAC CGAGCCCGCC GACCCCTTCG TCCAGCAACT GACCGGCACC
TCCGACCGGG CGCTGAAGCT GATGTCGCTG CTACCGCTGA AGGAGAGCAT GGAACCGGCC
AAGAGCGGGC TTACCTATGC CCTGTCGCAG TCGCTCAGTC TGCGCGACGC GCTCGCCGAA
ATGATCTGGC AGGGGGTCGG CGAGGCGACC GTGCAGGACG GCGAAAAAGC GCCGGTGGGA
TCGATTTCGA TGAGCCGCCT GCTCGAACTG GGCCGCAAGG CATGA
|
|---|
| Protein sequence | MSMIEISNVT KRYGAATVVD NVSMRVEKGS ITVIVGTSGS GKSTLMRMIN RLVPISEGEI
FVGGQNVMDV EVTELRRRIG YAIQGHGLFP HRTVAQNIAT VPQLLDWDAT RISRRVEELL
GLFNLDPADF ADKYPHQLSG GQQQRVGVAR ALAAEPELLL MDEPFGALDP VIRGKAQDDL
LAIQKQFGTT VILVTHDMDE AFHLGNQIAV MSEGRLLQCS TPEKILTEPA DPFVQQLTGT
SDRALKLMSL LPLKESMEPA KSGLTYALSQ SLSLRDALAE MIWQGVGEAT VQDGEKAPVG
SISMSRLLEL GRKA
|
|---|
| |