Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0138 |
Symbol | |
ID | 6978848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 131645 |
End bp | 133345 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394849 |
Product | Long-chain-fatty-acid--CoA ligase |
Protein accession | YP_002279666 |
Protein GI | 209547749 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.938727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.187232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCA TTTCCGTCCA TCCGAACGGA GCCAAGCCTG AAAAACCCTG GCTTGCCGCC TATCCGGATG TGGTTCCGGC CGAGCTTCCG CCGCTGGAAT ATGCCTCGCT GGCGGAACTG CTGGAAAAAT CCTGCGCCCG TTTCGCCGAC CGCACCGCCT TTGCCAGCAT GGGCAAGGCG ATGAGCTACC GCGAGTTGGA AAGCCAGACG CGCAAGGTGG CCGCCTGGCT GCAGAGCACC GGCCTTCAAA AGGGCGACCG CGTCGCAGTG ATGATGCCGA ACGTGCTGCA GAACCCGGTC GCCACCTACG CCATCCTCAG AGCCGGTCTC GTTGTCGTCA ACGTCAATCC GCTTTATACG CCGCGCGAGC TCGAACATCA GTTGCGCGAT TCCGGCGCCA AGGCGATCTT CGTGCTGGAA AATTTCGCCC GCACGGTGGA GCAGGTCCTG AACAAGACCG ACCTCAAGCA TGTCGTCGTC ACCTCGCTCG GCGAAATGCT GGGGCTGAAG GGGCTGATCG TCAATTTCGC CGTGCGCAAG GTGAAGAAGC TCGTTCCCTC CTGGTCGATC CCTCAGCACA AAAGCTTCGG CCAGGTGCTG CGCGAAGGGG CGAATAAAAC CCTGCAGCCG GTCACGCTTG CCGGCAGCGA TATCGCCTTC CTGCAATATA CCGGCGGCAC GACCGGCGTT GCCAAAGGCG CGGTGCTGAC GCATGCAAAC CTGCTTGCCA ACAAGCTGCA GCTGTCGCTC TGGCTCAGAT CGGCCTTCGA GCGCAAGAAA CAGCCCGAGG TGCTGAATTT CCTCTGCGCC CTGCCGCTCT ACCACATCTT CGCGCTGACG GTGAATTCGC TAATGGGCAT GTCGCTCGGC GCCCGCAATA TCCTGATTGC CAATCCGCGC GACATTCCCG GTCTCGTCAA GGAATTCGGC AAGTCCGATG TGCATATCTT TCCCGGCCTC AATACGCTGT TCAATGCGCT GATGAACAAT GCCGATTTCG CCAAGCTCGA TTTCTCCCCG CTGATCATGT CGCTCGGCGG CGGCATGGCC GTGCAGCGCC CGGTCGCCGA ACGCTGGCTG AAAATAACCG GCACGGCGGT GACCGAGGGC TACGGCCTTT CCGAGACCTC GCCAGTCGCC ACCGCCAATC GCTTCGATTC GCCTGAGTTC ACCGGCTCGA TCGGCCTGCC GATGCCCTCC ACCGATCTCG ATATCCGCGA CGAGGACGGA AAATCGCTGC CGCTCGGCGA GGTCGGCGAG ATCTGCATCC GCGGGCCGCA GGTGATGGCC GGCTATTGGC AGAAGCCGGA GGAGACGGCG CGGGTGATGA CCGAGGACGG TTATTTCCGC TCTGGAGATA TGGGTTTCAT GGATGCGCGC GGCTATACCA AGATCGTCGA CCGCAAGAAG GACATGATCC TGGTTTCCGG CTTCAACGTC TATCCGAACG AGATCGAGGA AATCGCCGCC ATGCATTCCG GCATCCTCGA GGCAGCCGCC ATCGGCGTGC CGGACGGGCA TTCGGGCGAG GCGGTGAAAC TCTTCGTGGT CAGGAAGGAT CCGAAGCTGA CCGAGGCCGA GGTGAAGGCC CATTGCATCG CCAACCTCAC CAATTACAAA CGCCCACGCT TCATTGAATT CCGCACCGAG CTGCCGAAGT CGCCGGTCGG TAAGATCCTG CGCAAGGACC TGCGCGGCTG A
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Protein sequence | MNSISVHPNG AKPEKPWLAA YPDVVPAELP PLEYASLAEL LEKSCARFAD RTAFASMGKA MSYRELESQT RKVAAWLQST GLQKGDRVAV MMPNVLQNPV ATYAILRAGL VVVNVNPLYT PRELEHQLRD SGAKAIFVLE NFARTVEQVL NKTDLKHVVV TSLGEMLGLK GLIVNFAVRK VKKLVPSWSI PQHKSFGQVL REGANKTLQP VTLAGSDIAF LQYTGGTTGV AKGAVLTHAN LLANKLQLSL WLRSAFERKK QPEVLNFLCA LPLYHIFALT VNSLMGMSLG ARNILIANPR DIPGLVKEFG KSDVHIFPGL NTLFNALMNN ADFAKLDFSP LIMSLGGGMA VQRPVAERWL KITGTAVTEG YGLSETSPVA TANRFDSPEF TGSIGLPMPS TDLDIRDEDG KSLPLGEVGE ICIRGPQVMA GYWQKPEETA RVMTEDGYFR SGDMGFMDAR GYTKIVDRKK DMILVSGFNV YPNEIEEIAA MHSGILEAAA IGVPDGHSGE AVKLFVVRKD PKLTEAEVKA HCIANLTNYK RPRFIEFRTE LPKSPVGKIL RKDLRG
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