| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0133 |
|---|
| Symbol | |
|---|
| ID | 6978843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 125346 |
|---|
| End bp | 126002 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394844 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002279661 |
|---|
| Protein GI | 209547744 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.440249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAAC AGCCGGTCGC AACGCGCAGG CGCAATCAGC AGCATCCCGG CCAGCCGCGC
CGGATCCCGA GCCAACAGCG CGGCCGCGAC CGCTTCGATA AGATCCTCGC CGTCGCTTCC
GAGCTGATCG AAAGCCATGG CAGCGATGGC TTGAAGATGA GCGAGATCGT CGAAAAGGCC
GGTCTGTCCT TCGGCGCTCT CTACCAATAT TTTCCCGACA AGAGCGCGAT CATCCGCACA
TTGGCCGAGC GCTTCAACGA GGAGGGCAGG CGCTGCGTCG AGGCGGAACT GGCTGAGGTG
ACCGACGCTG CGGCGCTCAC CGGCGCGCTT GCCAATATCG CCGACGAATA TTACGCCTTT
TTCCGTCGTG AGCCGGTGAT GCGCGACATC TGGCATGCGA CCCATACCGA CAAGCTGCTG
CAACAGGTCG ATGCCGAGGA CATGGAATTC CACGCCCGGG CATTGCTCGC CGTGCTCGTG
CGCCTGTGGC CGGATCGCGA CAGCGGCGAG CTTCTGGCGA TCGCCCGGCT GACGATGCAG
CTGCTTGCCG CCGCCGTACG TTATGCCGTT TCGCTTGGTG CCAAGGAGGG CGACGCGGCG
ATTGCCCTGT TCAAGAAGAT GCAGGGACTC GATATCGGCC GTCTGTTGCT GGAATAG
|
|---|
| Protein sequence | MSEQPVATRR RNQQHPGQPR RIPSQQRGRD RFDKILAVAS ELIESHGSDG LKMSEIVEKA
GLSFGALYQY FPDKSAIIRT LAERFNEEGR RCVEAELAEV TDAAALTGAL ANIADEYYAF
FRREPVMRDI WHATHTDKLL QQVDAEDMEF HARALLAVLV RLWPDRDSGE LLAIARLTMQ
LLAAAVRYAV SLGAKEGDAA IALFKKMQGL DIGRLLLE
|
|---|
| |